Publications
2024
- PublishedA diversity of diversities: Do complex environmental effects underpin associations between below- and above-ground taxa?
Seaton, F., George, P., Alison, J., Jones, D. L., Creer, S., Smart, S. M., Emmett, B. A. & Robinson, D., 1 Jul 2024, In: Journal of Ecology. 112, 7, p. 1550-1564 15 p.
Research output: Contribution to journal › Article › peer-review
- PublishedAirborne DNA reveals predictable spatial and seasonal dynamics of fungi
Abrego, N., Furneaux, B., Hardwick, B., Somervuo, P., Palorinne, I., Aguilar-Trigueros, C. A., Andrew, N. R., Babiy, U. V., Bao, T., Bazzano, G., Bondarchuk, S. N., Bonebrake, T. C., Brennan, G. L., Bret-Harte, S., Bässler, C., Cagnolo, L., Cameron, E. K., Chapurlat, E., Creer, S., D'Acqui, L. P., de Vere, N., Desprez-Loustau, M-L., Dongmo, M. A. K., Jacobsen, I. B. D., Fisher, B. L., Flores de Jesus, M., Gilbert, G. S., Griffith, G. W., Gritsuk, A. A., Gross, A., Grudd, H., Halme, P., Hanna, R., Hansen, J., Hansen, L. H., Hegbe, A. D. M. T., Hill, S., Hogg, I. D., Hultman, J., Hyde, K. D., Hynson, N. A., Ivanova, N., Karisto, P., Kerdraon, D., Knorre, A., Krisai-Greilhuber, I., Kurhinen, J., Kuzmina, M., Lecomte, N., Lecomte, E., Loaiza, V., Lundin, E., Meire, A., Mešić, A., Miettinen, O., Monkhouse, N., Mortimer, P., Müller, J., Nilsson, R. H., Nonti, P. Y. C., Nordén, J., Nordén, B., Norros, V., Paz, C., Pellikka, P., Pereira, D., Petch, G., Pitkänen, J-M., Popa, F., Potter, C., Purhonen, J., Pätsi, S., Rafiq, A., Raharinjanahary, D., Rakos, N., Rathnayaka, A. R., Raundrup, K., Rebriev, Y. A., Rikkinen, J., Rogers, H. M. K., Rogovsky, A., Rozhkov, Y., Runnel, K., Saarto, A., Savchenko, A., Schlegel, M., Schmidt, N. M., Seibold, S., Skjøth, C., Stengel, E., Sutyrina, S. V., Syvänperä, I., Tedersoo, L., Timm, J., Tipton, L., Toju, H., Uscka-Perzanowska, M., van der Bank, M., van der Bank, F. H., Vandenbrink, B., Ventura, S., Vignisson, S. R., Wang, X., Weisser, W. W., Wijesinghe, S. N., Wright, S. J., Yang, C., Yorou, N. S., Young, A., Yu, D. W., Zakharov, E. V., Hebert, P. D. N., Roslin, T. & Ovaskainen, O., 25 Jul 2024, In: Nature. 631, 8022, p. 835-842 8 p.
Research output: Contribution to journal › Article › peer-review
- PublishedAn integrated spatio-temporal view of riverine biodiversity using environmental DNA metabarcoding
Perry, W. B., Seymour, M., Orsini, L., Jâms, I. B., Milner, N., Edwards, F., Harvey, R., de Bruyn, M., Bista, I., Walsh, K., Emmett, B., Blackman, R., Altermatt, F., Lawson Handley, L., Mächler, E., Deiner, K., Bik, H. M., Carvalho, G., Colbourne, J., Cosby, B. J., Durance, I. & Creer, S., 23 May 2024, In: Nature Communications. 15, 1, p. 4372
Research output: Contribution to journal › Article › peer-review
- PublishedArtificial light and cloud cover interact to disrupt celestial migrations at night
Burke, L., Davies, T. W., Wilcockson, D., Jenkins, S. & Ellison, A., Sept 2024, In: Science of the Total Environment. 943, 173790.
Research output: Contribution to journal › Article › peer-review
- PublishedBacillus indicus and Bacillus subtilis as alternative health and colouration promoters to synthetic astaxanthin in cyprinid aquaculture species.
Baumgärtner, S., Creer, S., Jones, C., James, J. & Ellison, A., 15 Jan 2024, In: Aquaculture. 578, 740016.
Research output: Contribution to journal › Article › peer-review
- PublishedBacteriophage cocktail shows no toxicity and improves the survival of Galleria mellonella infected with Klebsiella spp
Kelly, L. & Jameson, E., 13 Jun 2024, In: Journal of Virology. 98, 6, p. e0027224
Research output: Contribution to journal › Article › peer-review
- PublishedClimate change disrupts the seasonal coupling of plant and soil microbial nutrient cycling in an alpine ecosystem
Broadbent, A. A. D., Newbold, L. K., Pritchard, W. J., Michas, A., Goodall, T., Cordero, I., Giunta, A., Snell, H. S. K., Pepper, V. V. L. H., Grant, H. K., Soto, D. X., Kaufmann, R., Schloter, M., Griffiths, R. I., Bahn, M. & Bardgett, R. D., 30 Mar 2024, In: Global Change Biology. 30, 3, p. e17245
Research output: Contribution to journal › Article › peer-review
- PublishedCross-continental comparative experiences of wastewater surveillance and a vision for the 21st century
Perry, W. B., Chrispim, M. C., Barbosa, M. R. F., de Souza Lauretto, M., Razzolini, M. T. P., Nardocci, A. C., Jones, O., Jones, D. L., Weightman, A., Sato, M. I. Z., Montagner, C. & Durance, I., 1 Apr 2024, In: Science of the Total Environment. 919, 170842.
Research output: Contribution to journal › Article › peer-review
- PublishedDesign considerations for eDNA metabarcoding surveys
Perry, W. B., Pillay, K., George, P., Brennan, G., Lowe, A., Jones, L., Holman, L., Gibson, T., de Vere, N. & Creer, S., 19 Jan 2024, Applied Environmental Genomics. Berry, O. F., Holleley, C. E. & Jarman, S. N. (eds.). CRC Press
Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
- PublishedEnvironmental DNA reveals ecologically relevant spatial and temporal variation in fish assemblages between estuaries and seasons
Gibson, T., Baillie, C., Collins, R. A., Wangensteen, O. S., Corrigan, L., Ellison, A., Heddell-Cowie, M., Westoby, H., Byatt, B., Lawson-Handley, L., Soto, A. Z., Creer, S., Genner, M. J. & Mariani, S., 1 Aug 2024, In: Ecological Indicators. 165, 112215.
Research output: Contribution to journal › Article › peer-review
- PublishedExamining the stability of viral RNA and DNA in wastewater: Effects of storage time, temperature, and freeze-thaw cycles
Williams, R. C., Perry, W. B., Lambert-Slosarska, K., Futcher, B., Pellett, C., Richardson-O'Neill, I., Paterson, S., Grimsley, J. M. S., Wade, M. J., Weightman, A. J., Farkas, K. & Jones, D. L., 1 Aug 2024, In: Water research. 259, p. 121879
Research output: Contribution to journal › Article › peer-review
- PublishedGenome Assembly of the Dyeing Poison Frog Provides Insights into the Dynamics of Transposable Element and Genome-Size Evolution
Dittrich, C., Hoelzl, F., Smith, S., Fouilloux, C. A., Parker, D. J., O'Connell, L. A., Knowles, L. S., Hughes, M., Fewings, A., Morgan, R., Rojas, B. & Comeault, A. A., 5 Jun 2024, In: Genome Biology and Evolution. 16, 6
Research output: Contribution to journal › Article › peer-review
- PublishedHow not to describe a species: lessons from a tangle of anacondas (Boidae: Eunectes Wagler, 1830)
Wüster, W., Kaiser, H., Hoogmoed, M. S., Ceríaco, L. M. P., Dirksen, L., Dufresnes, C., Glaw, F., Hille, A., Köhler, J., Koppetsch, T., Milto, K. D., Shea, G. M., Tarkhnishvili, D. N., Thomson, S. A., Vences, M. & Böhme, W., Aug 2024, In: Zoological Journal of the Linnean Society. 201, 4, 26 p., zlae099.
Research output: Contribution to journal › Article › peer-review
- PublishedLand management shapes drought responses of dominant soil microbial taxa across grasslands
Lavallee, J. M., Chomel, M., Alvarez Segura, N., de Castro, F., Goodall, T., Magilton, M., Rhymes, J. M., Delgado-Baquerizo, M., Griffiths, R. I., Baggs, E. M., Caruso, T., de Vries, F. T., Emmerson, M., Johnson, D. & Bardgett, R. D., 2 Jan 2024, In: Nature Communications. 15, 1, p. 29
Research output: Contribution to journal › Article › peer-review
- PublishedMolecular ecology of microbiomes in the wild: Common pitfalls, methodological advances and future directions
Fountain-Jones, N. M., Giraud, T., Zinger, L., Bik, H., Creer, S. & Videvall, E., 12 Jan 2024, In: Molecular Ecology. 33, 2, e1723.
Research output: Contribution to journal › Article › peer-review
- PublishedOnce upon a diamondback. Learning lessons about the fragility of desert life.
Wüster, W., 2024, Lost Frogs and Hot Snakes. Herpetologists' Tales from the Field. Crump, M. L. (ed.). Ithaca, NY: Comstock Publishing Associates, p. 145-150 6 p.
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedOne Health: Circadian Medicine Benefits Both Non-human Animals and Humans Alike
Farag, H., Murphy, B., Templeman, J., Hanlon, C., Joshua, J., Koch, T., Niel, L., Shoveller, A., Bedecarrats, G., Ellison, A., Wilcockson, D. & Martino, T., 20 Feb 2024, In: Journal of Biological Rhythms. 39, 3, p. 237-269 33 p.
Research output: Contribution to journal › Review article › peer-review
- PublishedPhylosymbiosis shapes skin bacterial communities and pathogen-protective function in Appalachian salamanders
Osborne, O., Jiménez, R., Byrne, A., Gratwicke, B., Ellison, A. & Muletz-Wolz, C., 11 Jun 2024, In: The ISME Journal. 18, 1
Research output: Contribution to journal › Article › peer-review
- PublishedPreclinical Evaluation of the Neutralising Efficacy of Three Monospecific Antivenoms Against the Venoms of Five African Echis Species, Including the Recently Partitioned E. ocellatus and E. romani
Edge, R. J., Marriott, A. E., Keen, M., Xie, T., Crittenden, E., Dawson, C. A., Wilkinson, M. C., Wüster, W., Casewell, N. R., Ainsworth, S. & Menzies, S. K., 19 Mar 2024, Social Science Research Network (SSRN), p. 1, 37 p.
Research output: Working paper › Preprint
- PublishedPredation on the Endangered Hungarian Meadow Viper in Pastures and Hayfields: Insights From Plasticine Models
Móré, A., Üveges, B., Simics, J., Radovics, D., Kovács, G., Bancsik, B., Wenner, B., Budai, M., Tisza, Á., Vadász, C., Mizser, S., Tóthmérész, B. & Mizsei, E., 23 May 2024, In: Rangeland Ecology and Management. 95, p. 68-76 8 p.
Research output: Contribution to journal › Article › peer-review
- PublishedProtecting stable biological nomenclatural systems enables universal communication: A collective international appeal
1558 additional coauthors, Jul 2024, In: BioScience. 74, 7, p. 467-472 6 p.
Research output: Contribution to journal › Article › peer-review
- PublishedRestless nights when sick: ectoparasite infections alter rest-activity cycles of diurnal fish hosts
Arapi, E., Reynolds, M., Ellison, A. & Cable, J., Mar 2024, In: Parasitology. 151, 3, p. 251-259 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSingle-fly genome assemblies fill major phylogenomic gaps across the Drosophilidae Tree of Life
Kim, B. Y., Gellert, H. R., Church, S. H., Suvorov, A., Anderson, S. S., Barmina, O., Beskid, S. G., Comeault, A. A., Crown, K. N., Diamond, S. E., Dorus, S., Fujichika, T., Hemker, J. A., Hrcek, J., Kankare, M., Katoh, T., Magnacca, K. N., Martin, R. A., Matsunaga, T., Medeiros, M. J., Miller, D. E., Pitnick, S., Schiffer, M., Simoni, S., Steenwinkel, T. E., Syed, Z. A., Takahashi, A., Wei, K. H-C., Yokoyama, T., Eisen, M. B., Kopp, A., Matute, D., Obbard, D. J., O'Grady, P. M., Price, D. K., Toda, M. J., Werner, T. & Petrov, D. A., 18 Jul 2024, In: PLoS Biology. 22, 7, p. e3002697
Research output: Contribution to journal › Article › peer-review
- PublishedSnake Identification in the Ancient Egyptian Brooklyn Medical Papyrus. A New Study of the Twenty-Four Extant Registers of the "Snakebite Papyrus"
Sanchez, G. M., Meltzer, E. S., Wüster, W., Casewell, N. R. & Schuett, G. W., 15 Jun 2024, Columbus, Georgia, USA: Lockwood Press. 212 p.
Research output: Book/Report › Book
- PublishedSoil metabolomics - current challenges and future perspectives
Brown, R., Reay, M. K., Centler, F., Chadwick, D., Bull, I. D., McDonald, J., Evershed, R. P. & Jones, D. L., 1 Jun 2024, In: Soil Biology and Biochemistry. 109382.
Research output: Contribution to journal › Article › peer-review
- E-pub ahead of printToward the integration of speciation research
Stankowski, S., Cutter, A. D., Satokangas, I., Lerch, B. A., Rolland, J., Smadja, C. M., Marzal, J. C. S., Cooney, C. R., Feulner, P. G. D., Domingos, F. M. C. B., North, H. L., Yamaguchi, R., Butlin, R. K., Wolf, J. B. W., Coughlan, J., Heidbreder, P., Hernandez-Guttierrez, R., Barnard-Kubow, K. B., Peede, D., Rancilhac, L., Salvador, R. B., Thompson, K. A., Stacy, E. A., Moyle, L. C., Garlovsky, M. D., Maulana, A., Kantelinen, A., Cacho, N. I., Schneemann, H., Dominguez, M., Dopman, E. B., Lohsa, K., Rometsch, S. J., Comeault, A., Merrill, R. M., Scordato, E. S. C., Singhal, S., Parssinen, V., Lackey, A. C. R., Kumar, S., Meier, J. I., Barton, N., Fraisse, C., Ravinet, M. & Kulumni, J., 16 Feb 2024, (E-pub ahead of print) In: Evolutionary Journal of the Linnean Society. 3, 1
Research output: Contribution to journal › Review article › peer-review
- PublishedVoluntary thermal maximum of grassland vipers (Vipera spp.): environmental drivers and local adaptation
Radovics, D., Sos, T., Mebert, K., Üveges, B., Budai, M., Rák, G., Szabolcs, M., Lengyel, S. & Mizsei, E., 2 May 2024, In: Zoological Journal of the Linnean Society. 201, 1, p. 159-168 10 p.
Research output: Contribution to journal › Article › peer-review
2023
- Published100 years of anthropogenic impact causes changes in freshwater functional biodiversity
Eastwood, N., Zhou, J., Derelle, R., Abdallah, M. A-E., Stubbings, W. A., Jia, Y., Crawford, S. E., Davidson, T. A., Colbourne, J. K., Creer, S., Bik, H., Hollert, H. & Orsini, L., 7 Nov 2023, In: Elife. 12
Research output: Contribution to journal › Article › peer-review
- PublishedA new chromosome-assigned Mongolian gerbil genome allows characterization of complete centromeres and a fully heterochromatic chromosome
Brekke, T. D., Papadopulos, A. S. T., Julia, E., Fornas, O., Fu, B., Yang, F., de la Fuente, R., Page, J., Baril, T., Hayward, A. & Mulley, J., May 2023, In: Molecular Biology and Evolution. 40, 5, msad115.
Research output: Contribution to journal › Article › peer-review
- PublishedAncient Egypt had far more venomous snakes than the country today, according to our new study of a scroll
Winder, I. C. & Wüster, W., 16 Oct 2023, The Conversation.
Research output: Contribution to specialist publication › Article
- PublishedAposematism and Batesian mimicry in snakes: through the visible spectrum and beyond?
Wuster, C. & Wüster, W., 26 Feb 2023, In: Herpetology Notes. 16, p. 165-170
Research output: Contribution to journal › Article › peer-review
- PublishedBehavioural individuality determines infection risk in clonal ant colonies
Li, Z., Bhat, B., Frank, E. T., Oliveira-Honorato, T., Azuma, F., Bachmann, V., Parker, D. J., Schmitt, T., Economo, E. P. & Ulrich, Y., 26 Aug 2023, In: Nature Communications. 14, 1, 5233.
Research output: Contribution to journal › Article › peer-review
- PublishedBungarus fasciatus venom from eastern and north-east India: venom variation and immune cross-reactivity with Indian polyvalent antivenoms
Talukdar, A., Malhotra, A., Lalremsanga, H. T., Santra, V. & Doley, R., Mar 2023, In: Journal of Proteins and Proteomics. 14, 1, p. 61-76
Research output: Contribution to journal › Article › peer-review
- PublishedBungled Bungarus: lessons from a venomous snake complex illustrate why taxonomic decisions belong in taxonomy-competent journals
Wüster, W. & Kaiser, H., 31 May 2023, In: Zootaxa. 5297, 1, p. 139-143 5 p.
Research output: Contribution to journal › Article › peer-review
- E-pub ahead of printComparative population genomics of manta rays has global implications for management
Humble, E., Hosegood, J., Carvalho, G., De Bruyn, M., Creer, S., Stevens, G. M. W., Armstrong, A., Bonfil, R., Deakos, M., Fernando, D., Froman, N., Peel, L. R., Pollett, S., Ponzo, A., Stewart, J. D., Wintner, S. & Ogden, R., 23 Nov 2023, (E-pub ahead of print) In: Molecular Ecology.
Research output: Contribution to journal › Article › peer-review
- PublishedCooling waters: Phages to treat urinary tract infections-Phage Cartoon by Ellie Jameson
Jameson, E., 1 Sept 2023, In: PHAGE (New Rochelle, N.Y.). 4, 3, p. 111
Research output: Contribution to journal › Article
- PublishedDoes The Glucocorticoid Stress Response Make Toads More Toxic? An Experimental Study on The Regulation of Bufadienolide Toxin Synthesis
Üveges, B., Kalina, C., Szabó, K., Móricz, Á. M., Holly, D., Gabor, C. R., Hettyey, A. & Bókony, V., 2023, In: Integrative Organismal Biology. 5, 1, p. obad021 obad021.
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental DNA biomonitoring in biodiversity hotspots: A case study of fishes of the Okavango Delta
von der Heyden, S., Neef, G., Grevesse, T., Cwecwe, Y., Sado, T., Miya, M., Mosie, I., Creer, S., Skelton, P. & von Brandis, R., 28 Nov 2023, In: Environmental DNA. 5, 6, p. 1720-1731
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental DNA metabarcoding for fish diversity assessment in a macrotidal estuary: A comparison with established fish survey methods
Gibson, T., Carvalho, G., Ellison, A., Gargiulo, E., Hatton-Ellis, T., Handley, L. L., Mariani, S., Collins, R. A., Sellers, G., Distaso, M., Zampieri, C. & Creer, S., 1 Nov 2023, In: Estuarine, Coastal and Shelf Science. 294, 108522.
Research output: Contribution to journal › Article › peer-review
- PublishedEvidence for cryptic sex in parthenogenetic stick insects of the genus Timema
Freitas, S., Parker, D. J., Labédan, M., Dumas, Z. & Schwander, T., 27 Sept 2023, In: Proceedings of the Royal Society B: Biological Sciences. 290, 2007, 11 p., 20230404.
Research output: Contribution to journal › Article › peer-review
- PublishedFacultative parthenogenesis: a transient state in transitions between sex and obligate asexuality in stick insects?
Larose, C., Lavanchy, G., Freitas, S., Parker, D. & Schwander, T., 2023, In: Peer Community Journal. 3, e60.
Research output: Contribution to journal › Article › peer-review
- PublishedGenetic assimilation of ancestral plasticity during parallel adaptation to Zinc contamination in Silene uniflora
Wood, D., Holmberg, J., Osborne, O., Helmstetter, A. J., Dunning, L. T., Ellison, A., Smith, R. J., Lighten, J. & Papadopulos, A. S. T., Mar 2023, In: Nature Ecology and Evolution. 7, 3, p. 414-423 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedGenomics reveals broad hybridization in deeply divergent Palearctic grass and water snakes (Natrix spp.)
Schöneberg, Y., Winter, S., Arribas, O., Di Nicola, M. R., Master, M., Owens, J. B., Rovatsos, M., Wüster, W., Janke, A. & Fritz, U., Jul 2023, In: Molecular Phylogenetics and Evolution. 184, 9 p., 107787.
Research output: Contribution to journal › Article › peer-review
- SubmittedHigh standing diversity masks extreme genetic erosion in a declining snake
Pozzi, A., Owens, J. B., Üveges, B., Major, T., Morris, E., Graham, S., Togridou, A., Papadopulos, A. S. T., Wüster, W. & Barlow, A., 21 Sept 2023, (Submitted) p. 1-28, 28 p. (bioRxiv).
Research output: Working paper › Preprint
- PublishedImpact of Phylogenetic Tree Completeness and Misspecification of Sampling Fractions on Trait Dependent Diversification Models
Mynard, P., Algar, A., Lancaster, L. T., Bocedi, G., Fahri, F., Gubry-Rangin, C., Lupiyaningdyah, P., Nangoy, M., Osborne, O., Papadopulos, A. S. T., Sudiana, I. M., Juliandi, B., Travis, J. & Herrera-Alsina, L., 19 May 2023, In: Systematic Biology. 72, 1, p. 106-119 14 p.
Research output: Contribution to journal › Article › peer-review
- PublishedIntroduction to special issue: the ecology and evolution of plants in extreme environments
Picó, F. X., Abbott, R. J., Llambi, L. D., Rajakaruna, N., Papadopulos, A. S. T. & Nagy, L., Jan 2023, In: Plant Ecology & Diversity. 15, 5-6, p. 179-182 4 p.
Research output: Contribution to journal › Article › peer-review
- PublishedIsolation of new Klebsiella pneumoniae phage PSKP16
Sadeqi, S., Michniewski, S., Nikkhahi, F., Jameson, E. & Marashi, S. M. A., 1 Feb 2023, In: Iranian journal of microbiology. 15, 1, p. 62-68 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMaintenance and expansion of genetic and trait variation following domestication in a clonal crop
White, O. W., Biswas, M. K., Abebe, W. M., Dussert, Y., Kadebe, F., Nichols, R. A., Buggs, R. J. A., Demissew, S., Woldeyes, F., Papadopulos, A. S. T., Schwarzacher, T., Heslop-Harrison, P. J. S., Wilkin, P. & Borrell, J. S., Aug 2023, In: Molecular Ecology. 32, 15, p. 4165-4180
Research output: Contribution to journal › Article › peer-review
- PublishedMapping the root systems of individual trees in a natural community using genotyping-by-sequencing
Osborne, O., Dobreva, M. P., Papadopulos, A. S. T., de Moura, M. S. B., Brunello, A. T., de Queiroz, L. P., Pennington, R. T., Lloyd, J. & Savolainen, V., 1 May 2023, In: New Phytologist. 238, 3, p. 1305-1317 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMate today, gone tomorrow: male-on-female cannibalism in Zamenis longissimus (Laurenti, 1768) in North Wales
Major, T., Bracegirdle, R., Gandini, A., Limia Russel, G., Pozzi, A., Morgan, R., Mulley, J. & Wüster, W., 17 Jan 2023, In: Herpetology Notes. 16, p. 51-54 4 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMedically important snakes and snakebite envenoming in Iran
Dehghani, R., Monzavi, S. M., Mehrpour, O., Shirazi, F. M., Hassanian-Moghaddam, H., Keyler, D. E., Wüster, W., Westerström, A. & Warrell, D. A., 23 May 2023, In: Toxicon. 230, 26 p., 107149.
Research output: Contribution to journal › Article › peer-review
- PublishedMicroscale pollen release and dispersal patterns in flowering grass populations
Frisk, C. A., Apangu, G. P., Petch, G. M., Creer, S., Hanson, M., Adams-Groom, B. & Skjoth, C. A., 1 Jul 2023, In: Science of the Total Environment. 880, 163345.
Research output: Contribution to journal › Article › peer-review
- PublishedMineralogy affects prokaryotic community composition in an acidic metal mine
Kelly, L., Rivett, D. W., Pakostova, E., Creer, S., Cotterell, T. & Johnson, B., 1 Jan 2023, In: Microbiological Research. 266, 127257.
Research output: Contribution to journal › Article › peer-review
- PublishedMolecular phylogeny reveals distinct evolutionary lineages of the banded krait, Bungarus fasciatus (Squamata, Elapidae) in Asia
Biazkula, L., Lalremsanga, H., Santra, V., Dhara, A., Ahmed, M. T., Mallick, Z., Kuttalam, S. R., Amarasinghe, A. A. T. & Malhotra, A., 4 Feb 2023, In: Scientific Reports. 13, 1, 14 p., 2061.
Research output: Contribution to journal › Article › peer-review
- PublishedMultilevel comparison of Indian Naja venoms and their cross-reactivity with Indian polyvalent antivenoms
Deka, A., Bhatia, S., Santra, V., Bharti, O., Lalremsanga, H., Martin, G., Wüster, W., Owens, J. B., Graham, S., Doley, R. & Malhotra, A., 1 Apr 2023, In: Toxins. 15, 4, 24 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMuseum DNA reveals a new, potentially extinct species of rinkhals (Serpentes: Elapidae: Hemachatus) from the Eastern Highlands of Zimbabwe
Major, T., Renk, P., Reissig, J., Paijmans, J., Morris, E., Hofreiter, M., Barlow, A., Broadley, D. G. & Wüster, W., 27 Sept 2023, In: PLoS ONE. 18, 9, 19 p., e0291432.
Research output: Contribution to journal › Article › peer-review
- PublishedOn the importance of types and the perils of “en passant” taxonomy: a brief history of the typification of Coluber naja Linnaeus, 1758 (Serpentes: Elapidae) and its implications, with the designation of a lectotype
Wüster, W. & Tillack, F., 20 Sept 2023, In: Zootaxa. 5346, 4, p. 403-419
Research output: Contribution to journal › Article › peer-review
- PublishedOne Size Fits All—Venomics of the Iberian Adder (Vipera seoanei, Lataste 1878) reveals low levels of venom variation across its distributional range
Avella, I., Damm, M., Freitas, I., Wüster, W., Lucchini, N., Zuazo, Ó., Süssmuth, R. & Martínez-Freiría, F., 1 Jun 2023, In: Toxins. 15, 6, 22 p., 371.
Research output: Contribution to journal › Article › peer-review
- PublishedTaxonomic investigation of the zooplanktivorous Lake Malawi cichlids Copadichromis mloto (Iles) and C. virginalis (Iles)
Turner, G. F., Crampton, D. A., Rusuwa, B., Hooft van Huysduynen, A. & Svardal, H., Jun 2023, In: Hydrobiologia. 850, 10-11, p. 2165-2175 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe presence of territorial damselfish predicts choosy client species richness at cleaning stations
Dunkley, K., Whittey, K. E., Ellison, A., Perkins, S. E., Cable, J. & Herbert-Read, J., 28 Mar 2023, In: Behavioral Ecology. 34, 2, p. 269-277 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedTwo Can Play at That Game: Phage-Antibiotic Synergy-Phage Cartoon by Ellie Jameson
Jameson, E., 1 Jun 2023, In: PHAGE (New Rochelle, N.Y.). 4, 2, p. 54
Research output: Contribution to journal › Article
- PublishedUK DNA working group eDNA week, January 2022
Handley, L. L., Blackwell, T., Broadhurst, H. A., Clark, K., Davison, P. I., England, J., Mariani, S., McDevitt, A. D., Pillay, G. K., Read, D., Walsh, K., Nisbet, A. & Creer, S., 1 Jan 2023, In: Environmental DNA. 5, 1, p. 18-24 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedViral metagenomics reveals diverse virus-host interactions throughout the soil depth profile
Muscatt, G., Cook, R., Millard, A., Bending, G. D. & Jameson, E., 1 Dec 2023, In: mBio. 14, 6, p. e0224623
Research output: Contribution to journal › Article › peer-review
- E-pub ahead of printWhat bit the Ancient Egyptians? Niche modelling to identify the snakes described in the Brooklyn medical papyrus
McBride, E., Winder, I. C. & Wüster, W., 7 Oct 2023, (E-pub ahead of print) In: Environmental Archaeology.
Research output: Contribution to journal › Article › peer-review
- PublishedYou are what your ancestors ate: retained bufadienolide resistance in the piscivorous water cobra Naja annulata (Serpentes: Elapidae)
Fletcher, J., Malhotra, A. & Wüster, W., 1 Jul 2023, In: Herpetological Journal. 33, 3, p. 83-87 5 p.
Research output: Contribution to journal › Article › peer-review
2022
- PublishedA Big Problem : Sci-Fi phage therapy comic
Jameson, E., 1 Oct 2022, Resist Now : A science Fiction comic anthology about superbugs. p. 34-41 8 p.
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedA comparison of precipitation and filtration-based SARS-CoV-2 recovery methods and the influence of temperature, turbidity, and surfactant load in urban wastewater
Kevill, J. L., Pellett, C., Farkas, K., Brown, M. R., Bassano, I., Denise, H., McDonald, J. E., Malham, S. K., Porter, J., Warren, J., Evens, N. P., Paterson, S., Singer, A. C. & Jones, D. L., 20 Feb 2022, In: Science of the Total Environment. 808, 151916.
Research output: Contribution to journal › Article › peer-review
- PublishedA new species of deep-water Lethrinops (Cichlidae) from Lake Malawi
Turner, G. F., Dec 2022, In: Journal of Fish Biology. 101, 6, p. 1405-1410 6 p.
Research output: Contribution to journal › Article › peer-review
- PublishedA paper microfluidic device based colorimetric sensor for the detection and discrimination of elapid versus viper envenomation
Ramana, L., Mathapati, S. S., Salvi, N., Khadilkar, M. V., Malhotra, A., Santra, V. & Sharma, T. K., 21 Feb 2022, In: Analyst. 147, 4, p. 685-694
Research output: Contribution to journal › Article › peer-review
- PublishedAccounting for Dilution of SARS-CoV-2 in Wastewater Samples Using Physico-Chemical Markers
Wilde, H., Perry, W. B., Jones, O., Kille, P., Weightman, A., Jones, D. L., Cross, G. & Durance, I., 15 Sept 2022, In: Water. 14, 18, 2885.
Research output: Contribution to journal › Article › peer-review
- PublishedAnalytical strategies in venomics.
Slaagboom, J., Kaal, C., Arrahman, A., Vonk, F. J., Somsen, G. W., Calvete, J. J., Wüster, W. & Kool, J., 1 Apr 2022, In: Microchemical Journal. 175, 22 p., 107187.
Research output: Contribution to journal › Article › peer-review
- PublishedBacterial Adaptation to Venom in Snakes and Arachnida
Esmaeilishirazifard, E., Usher, L., Trim, C., Sangal, V., Tyson, G. F., Barlow, A., Redway, K. F., Taylor, J. D., Kremida-Vlachou, M., Davies, S., Loftus, T. D., Lock, M. M. G., Wright, K., Dalby, A., Snyder, L. A. S., Wüster, W., Trim, S. & Moschos, S. A., 29 Jun 2022, In: Microbiology Spectrum. 10, 3, 16 p., e0240821.
Research output: Contribution to journal › Article › peer-review
- PublishedBacteriophage Dark Matter - Phage Cartoon by Ellie Jameson
Jameson, E., 1 Sept 2022, In: PHAGE (New Rochelle, N.Y.). 3, 3, p. 127
Research output: Contribution to journal › Article
- PublishedBacteriophages: Past, Present and Future - Phage Cartoon by Ellie Jameson
Jameson, E., 1 Jun 2022, In: PHAGE (New Rochelle, N.Y.). 3, 2, p. 67
Research output: Contribution to journal › Article
- PublishedBlack-necked spitting cobra Naja nigricollis Reinhardt, 1843 repels a large pack of banded mongooses (Mungos mungo).
Madsen, T. & Wüster, W., 15 Sept 2022, In: African Herp News. 80, p. 75-78 4 p.
Research output: Contribution to journal › Article › peer-review
- PublishedChallenges to Implementing Environmental-DNA Monitoring in Namibia
Perry, I., Jams, I. B., Casas-Mulet, R., Hamutoko, J., Marchbank, A., Lendelvo, S., Naomab, E., Mapani, B., Creer, S., Wanke, H., Durance, I. & Kille, P., 17 Jan 2022, In: Frontiers in Environmental Science. 9, 773991.
Research output: Contribution to journal › Article › peer-review
- PublishedConfirmation of Liopeltis rappi (Günther, 1860) in Himachal Pradesh
Kuttalam, S. R., Santra, V., Owens, J. B., Ahmed, M. T., Bharti, O., Selvan, M., Mukherjee, N. & Malhotra, A., Oct 2022, In: Hamadryad. 39, 1-2, p. 85-88
Research output: Contribution to journal › Article › peer-review
- PublishedConvergent consequences of parthenogenesis on stick insect genomes
Jaron, K. S., Parker, D. J., Anselmetti, Y., Tran Van, P., Bast, J., Dumas, Z., Figuet, E., François, C. M., Hayward, K., Rossier, V., Simion, P., Robinson-Rechavi, M., Galtier, N. & Schwander, T., 23 Feb 2022, In: Science Advances. 8, 8, eabg3842.
Research output: Contribution to journal › Article › peer-review
- PublishedConvergent evolution of toxin resistance in animals
van Thiel, J., Khan, M. A., Wouters, R. M., Harris, R. J., Casewell, N. R., Fry, B. G., Kini, R. M., Mackessy, S. P., Vonk, F. J., Wüster, W. & Richardson, M. K., Oct 2022, In: Biological Reviews. 97, 5, p. 1823-1843 21 p.
Research output: Contribution to journal › Article › peer-review
- PublishedCrop management shapes the diversity and activity of DNA and RNA viruses in the rhizosphere
Muscatt, G., Hilton, S., Raguideau, S., Teakle, G., Lidbury, I. D. E. A., Wellington, E. M. H., Quince, C., Millard, A., Bending, G. D. & Jameson, E., Dec 2022, In: Microbiome. 10, 1, 181.
Research output: Contribution to journal › Article › peer-review
- PublishedCurrent and future genetic technologies for fisheries and aquaculture: implications for the work of FAO
Friedman, KJ., Bartley, DM., Rodríguez-Ezpeleta, N., Mair, GC., Ban, N., Beveridge, M., Carolsfeld, J., Carvalho, G., Cowx, I., Dean, G., Glazov, E., Leber, K., Loftus, R., Martinsohn, J., Olesen, I., Soto, E., Van Eenennaam, A. L. & Vigar, JR., 2022. 56 p.
Research output: Contribution to conference › Paper › peer-review
- PublishedDNA metabarcoding reveals introduced species predominate in the diet of a threatened endemic omnivore, Telfair’s skink (Leiolopisma telfairii)
Tercel, M., Moorhouse-Gann, R., Cuff, J., Drake, L., Cole, N., Goder, M., Mootoocurpen, R. & Symondson, W., 1 Jan 2022, In: Ecology and Evolution. 12, 1, e8484.
Research output: Contribution to journal › Article › peer-review
- PublishedDaily patterns in parasite processes: diel variation in fish louse transcriptomes
Hunt, R., Cable, J. & Ellison, A., Jul 2022, In: International Journal for Parasitology. 52, 8, p. 509-518 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedDynamics of sex-biased gene expression during development in the stick insect Timema californicum
Djordjevic, J., Dumas, Z., Robinson-Rechavi, M., Schwander, T. & Parker, D. J., Aug 2022, In: Heredity. 129, 2, p. 113-122 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedEcological Speciation Promoted by Divergent Regulation of Functional Genes Within African Cichlid Fishes
Carruthers, M., Edgley, D. E., Saxon, A. D., Gabagambi, N. P., Shechonge, A., Miska, E. A., Durbin, R., Bridle, J. R., Turner, G. F. & Genner, M. J., Nov 2022, In: Molecular Biology and Evolution. 39, 11
Research output: Contribution to journal › Article › peer-review
- PublishedEpigenetic divergence during early stages of speciation in an African crater lake cichlid fish
Vernaz, G., Hudson, A. G., Santos, M. E., Fischer, B., Carruthers, M., Shechonge, A. H., Gabagambi, N. P., Tyers, A. M., Ngatunga, B. P., Malinsky, M., Durbin, R., Turner, G. F., Genner, M. J. & Miska, E. A., Dec 2022, In: Nature Ecology and Evolution. 6, 12, p. 1940-1951 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedFauxcurrence: simulating multi-species occurrences for null models in species distribution modelling and biogeography
Osborne, O., Fell, H. G., Atkins, H., Tol, J. V., Phillips, D., Herrerra-Alsina, L., Mynard, P., Bocedi, G., Gubry-Rangin, C., Lancaster, L. T., Creer, S., Nangoy, M., Fahri, F., Lupiyaningdyah, P., Sudiana, I. M., Juliandi, B., Travis, J., Papadopulos, A. S. T. & Algar, A. C., Jul 2022, In: Ecography. 2022, 7, e05880.
Research output: Contribution to journal › Article › peer-review
- PublishedGenetic ancestry of introduced populations of sand lizard (Lacerta agilis) in Wales
Owens, J. B., Wilkinson, J. W., Wüster, W., Barlow, A. & Papadopulos, A. S. T., 11 Oct 2022, Bangor: Natural Resources Wales. 32 p. (NRW Evidence Report; no. 596)
Research output: Book/Report › Commissioned report › peer-review
- PublishedGoing viral: phage therapy in Africa. Credit: Ellie Jameson
Jameson, E., 1 Dec 2022, In: PHAGE (New Rochelle, N.Y.). 3, 4, p. 183
Research output: Contribution to journal › Article
- PublishedHow do King Cobras move across a major highway? Unintentional wildlife crossing structures may facilitate movement
Jones, M. D., Marshall, B. M., Smith, S. N., Crane, M., Silva, I., Artchawakom, T., Suwanwaree, P., Waengsothorn, S., Wüster, W., Goode, M. & Strine, C. T., 17 Mar 2022, In: Ecology and Evolution. 12, 3, 15 p., e8691.
Research output: Contribution to journal › Article › peer-review
- PublishedHybridisation and chloroplast capture between distinct Themeda triandra lineages in Australia
Dunning, L. T., Olofsson, J., Papadopulos, A. S. T., Hibdige, S. G. S., Hidalgo, O., Leitch, I. J., Baleeiro, P. C., Ntshangase, S., Barker, N. & Jobson, R. W., Nov 2022, In: Molecular Ecology. 31, 22, p. 5846-5860 15 p.
Research output: Contribution to journal › Article › peer-review
- PublishedImpacts of herbivory by ecological replacements on an island ecosystem
Moorhouse-Gann, R., Vaughan, I., Cole, N., Goder, M., Tatayah, V., Jones, C., Mike, D., Young, R., Bruford, M., Rivers, M., Hipperson, H., Russo, I-R., Stanton, D. & Symondson, W., 1 Sept 2022, In: Journal of Applied Ecology. 59, 9, p. 2245–2261
Research output: Contribution to journal › Article › peer-review
- PublishedInterpopulational variation and ontogenetic shift in the venom composition of Lataste's viper (Vipera latastei, Boscá 1878) from northern Portugal
Avella, I., Calvete, J. J., Sanz, L., Wüster, W., Licata, F., Quesada-Bernat, S., Rodriguez, Y. & Martínez-Freiría, F., 15 Jul 2022, In: Journal of Proteomics. 263, 104613.
Research output: Contribution to journal › Article › peer-review
- PublishedLong term drought and warming alter soil bacterial and fungal communities in an upland heathland
Seaton, F., Reinsch, S., Goodall, T., White, N., Jones, D. L., Griffiths, R., Creer, S., Smith, A., Emmett, B. A. & Robinson, D. A., Sept 2022, In: Ecosystems. 25, 6, p. 1279-1294 16 p.
Research output: Contribution to journal › Article › peer-review
- PublishedLong-term cattle grazing shifts the ecological state of forest soils
Proesmans, W., Andrews, C., Gray, A., Griffiths, R., Keith, A., Nielsen, U. N., Spurgeon, D., Pywell, R., Emmett, B. & Vanbergen, A. J., Apr 2022, In: Ecology and Evolution. 12, 4, e8786.
Research output: Contribution to journal › Article › peer-review
- PublishedMadagascar's extraordinary biodiversity: Evolution, distribution, and use
Antonelli, A., Smith, R. J., Perrigo, A. L., Crottini, A., Hackel, J., Testo, W., Farooq, H., Torres Jiménez, M. F., Andela, N., Andermann, T., Andriamanohera, A. M., Andriambololonera, S., Bachman, S. P., Bacon, C. D., Baker, W. J., Belluardo, F., Birkinshaw, C., Borrell, J. S., Cable, S., Canales, N. A., Carrillo, J. D., Clegg, R., Clubbe, C., Cooke, R. S. C., Damasco, G., Dhanda, S., Edler, D., Faurby, S., de Lima Ferreira, P., Fisher, B. L., Forest, F., Gardiner, L. M., Goodman, S. M., Grace, O. M., Guedes, T. B., Henniges, M. C., Hill, R., Lehmann, C. E. R., Lowry, P. P., Marline, L., Matos-Maraví, P., Moat, J., Neves, B., Nogueira, M. G. C., Onstein, R. E., Papadopulos, A. S. T., Perez-Escobar, O. A., Phelps, L. N., Phillipson, P. B., Pironon, S., Przelomska, N. A. S., Rabarimanarivo, M., Rabehevitra, D., Raharimampionona, J., Rajaonah, M. T., Rajaonary, F., Rajaovelona, L. R., Rakotoarinivo, M., Rakotoarisoa, A. A., Rakotoarisoa, S. E., Rakotomalala, H. N., Rakotonasolo, F., Ralaiveloarisoa, B. A., Ramirez-Herranz, M., Randriamamonjy, J. E. N., Randriamboavonjy, T., Randrianasolo, V., Rasolohery, A., Ratsifandrihamanana, A. N., Ravololomanana, N., Razafiniary, V., Razanajatovo, H., Razanatsoa, E., Rivers, M., Sayol, F., Silvestro, D., Vorontsova, M. S., Walker, K., Walker, B. E., Wilkin, P., Williams, J., Ziegler, T., Zizka, A. & Ralimanana, H., 2 Dec 2022, In: Science. 378, 6623, eabf0869.
Research output: Contribution to journal › Article › peer-review
- PublishedMadagascar's extraordinary biodiversity: Threats and opportunities
Ralimanana, H., Perrigo, A. L., Smith, R. J., Borrell, J. S., Faurby, S., Rajaonah, M. T., Randriamboavonjy, T., Vorontsova, M. S., Cooke, R. S. C., Phelps, L. N., Sayol, F., Andela, N., Andermann, T., Andriamanohera, A. M., Andriambololonera, S., Bachman, S. P., Bacon, C. D., Baker, W. J., Belluardo, F., Birkinshaw, C., Cable, S., Canales, N. A., Carrillo, J. D., Clegg, R., Clubbe, C., Crottini, A., Damasco, G., Dhanda, S., Edler, D., Farooq, H., de Lima Ferreira, P., Fisher, B. L., Forest, F., Gardiner, L. M., Goodman, S. M., Grace, O. M., Guedes, T. B., Hackel, J., Henniges, M. C., Hill, R., Lehmann, C. E. R., Lowry, P. P., Marline, L., Matos-Maraví, P., Moat, J., Neves, B., Nogueira, M. G. C., Onstein, R. E., Papadopulos, A. S. T., Perez-Escobar, O. A., Phillipson, P. B., Pironon, S., Przelomska, N. A. S., Rabarimanarivo, M., Rabehevitra, D., Raharimampionona, J., Rajaonary, F., Rajaovelona, L. R., Rakotoarinivo, M., Rakotoarisoa, A. A., Rakotoarisoa, S. E., Rakotomalala, H. N., Rakotonasolo, F., Ralaiveloarisoa, B. A., Ramirez-Herranz, M., Randriamamonjy, J. E. N., Randrianasolo, V., Rasolohery, A., Ratsifandrihamanana, A. N., Ravololomanana, N., Razafiniary, V., Razanajatovo, H., Razanatsoa, E., Rivers, M., Silvestro, D., Testo, W., Torres Jiménez, M. F., Walker, K., Walker, B. E., Wilkin, P., Williams, J., Ziegler, T., Zizka, A. & Antonelli, A., 2 Dec 2022, In: Science. 378, 6623, eadf1466.
Research output: Contribution to journal › Review article › peer-review
- PublishedManaging human-mediated range shifts: understanding spatial, temporal and genetic variation in marine non-native species
Holman, L. E., Parker-Nance, S., de Bruyn, M., Creer, S., Carvalho, G. & Rius, M., 14 Mar 2022, In: Philosophical Transactions of The Royal Society B: Biological Sciences. 377, 1846, 20210025.
Research output: Contribution to journal › Article › peer-review
- PublishedMetamorphic common toads keep chytrid infection under control, but at a cost
Kásler, A., Ujszegi, J., Holly, D., Üveges, B., Móricz, Á. M., Herczeg, D. & Hettyey, A., 1 Jul 2022, In: Journal of Zoology. 317, 3, p. 159-169 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMohave rattlesnake (Crotalus scutulatus) identification revisited
Cardwell, M. D., Massey, D. J., Smelski, G. & Wüster, W., 1 Jun 2022, In: Wilderness and Environmental Medicine. 33, 2, p. 210-218
Research output: Contribution to journal › Article › peer-review
- PublishedMoving towards improved surveillance and earlier diagnosis of aquatic pathogens: from traditional methods to emerging technologies
MacAulay, S., Ellison, A., Kille, P. & Cable, J., Sept 2022, In: Reviews in Aquaculture. 14, 4, p. 1813-1829 17 p.
Research output: Contribution to journal › Review article › peer-review
- PublishedNovel genetic sex markers reveal unexpected lack of, and similar susceptibility to, sex reversal in free-living common toads in both natural and anthropogenic habitats
Nemesházi, E., Sramkó, G., Laczkó, L., Balogh, E., Szatmári, L., Vili, N., Ujhegyi, N., Üveges, B. & Bókony, V., Apr 2022, In: Molecular Ecology. 31, 7, p. 2032-2043 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedNovel insights into marine fish biodiversity across a pronounced environmental gradient using replicated environmental DNA analyses
Czachur, M. V., Seymour, M., Creer, S. & von der Heyden, S., 1 Jan 2022, In: Environmental DNA. 4, 1
Research output: Contribution to journal › Article › peer-review
- PublishedOca2 targeting using CRISPR/Cas9 in the Malawi cichlid Astatotilapia calliptera
Clark, B., Elkin, J., Marconi, A., Turner, G. F., Smith, A. M., Joyce, D., Miska, E. A., Juntti, S. A. & Santos, M. E., Apr 2022, In: Royal Society Open Science. 9, 4, 220077.
Research output: Contribution to journal › Article › peer-review
- PublishedPhylogenetic and morphological analysis of Gloydius himalayanus (Serpentes, Viperidae, Crotalinae), with the description of a new species
Kuttalam, S. R., Santra, V., Owens, J. B., Selvan, M., Mukherjee, N., Graham, S., Togridou, A., Bharti, O., Shi, J., Shanker, K. & Malhotra, A., 13 Dec 2022, In: European Journal of Taxanomy. 852, 1, p. 1-30 30 p., 1.
Research output: Contribution to journal › Article › peer-review
- PublishedPhylogenetic climatic niche conservatism in sandflies (Diptera: Phlebotominae) and their relatives
D'Agostino, E. R. R., Vivero, R., Romero, L., Bejarano, E., Hurlbert, A. H., Comeault, A. A. & Matute, D. R., 1 Oct 2022, In: Evolution: International Journal of Organic Evolution. 76, 10, p. 2361-2374
Research output: Contribution to journal › Article › peer-review
- PublishedPlants with arbuscular mycorrhizal fungi efficiently acquire Nitrogen from substrate additions by shaping the decomposer community composition and their net plant carbon demand
Chowdhury, S., Lange, M., Malik, A. A., Goodall, T., Huang, J., Griffiths, R. I. & Gleixner, G., Jun 2022, In: Plant and Soil. 475, 1, p. 473-490 18 p.
Research output: Contribution to journal › Article › peer-review
- PublishedRNA-viromics reveals diverse communities of soil RNA viruses with the potential to affect grassland ecosystems across multiple trophic levels
Hillary, L. S., Adriaenssens, E. M., Jones, D. L. & McDonald, J. E., 8 Apr 2022, In: ISME Communications. 2, 1, p. 34 34.
Research output: Contribution to journal › Article › peer-review
- PublishedRelative contribution of high and low elevation soil microbes and nematodes to ecosystem functioning
Semeraro, S., Kergunteuil, A., Sánchez-Moreno, S., Puissant, J., Goodall, T., Griffiths, R. & Rasmann, S., 5 Apr 2022, In: Functional Ecology. 36, 4, p. 974-986 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedRevision of the African cichlid fish genus Ctenochromis (Teleostei, Cichliformes), including a description of the new genus Shuja from Lake Tanganyika and the new species Ctenochromis scatebra from northern Tanzania
Genner, M. J., Hsu, L-L., Collins, R. A., Smith, A. M., Saxon, A. D., Shechonge, A. H., Ngatunga, B. P. & Turner, G. F., 11 May 2022, In: European Journal of Taxonomy. 819, 1, p. 23-54 32 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSafeguarding Imperiled Biodiversity and Evolutionary Processes in the Wallacea Center of Endemism
Struebig, M., Aninta, S. G., Beger, M., Bani, A., Barus, H., Brace, S., Davies, Z., De Brauwer, M., Diele, K., Djakiman, C., Djamaluddin, R., Drinkwater, R., Drumbell, A., Evans, D., Fusi, M., Herrera-Alsina, L., Iksander, D. T., Jompa, J., Juliandi, B., Lancaster, L. T., Limmon, G., Lindawati, Lo, M. G. Y., Lupiyaningdyah, P., McCannon, M., Meijaard, E., Mitchell, S. L., Mumbunan, S., O'Connell, D., Osborne, O., Papadopulos, A. S. T., Rahajoe, J. S., Rosaria, Rossiter, S. J., Rugayah, Rustiami, H., Salzmann, U., Sheherazade, Sudiana, I. M., Sukara, E., Tasirin, J. S., Tjoa, A., Travis, J. M. J., Trethowan, L., Trianto, A., Utteridge, T., Voigt, M., Winarni, N., Zakaria, Z., Edwards, D. P., Frantz, L. & Supriatna, J., Nov 2022, In: BioScience. 72, 11, p. 1118-1130 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSeasonal progression and differences in major floral resource use by bees and hoverflies in a diverse horticultural and agricultural landscape revealed by DNA metabarcoding
Lowe, A., Jones, L., Brennan, G., Creer, S. & de Vere, N., Jun 2022, In: Journal of Applied Ecology. 59, 6, p. 1484-1495
Research output: Contribution to journal › Article › peer-review
- PublishedSlow and Steady Wins the Race: Using Non-native Tortoises to Rewild Islands off Mauritius
Jones, C., Tatayah, V., Moorhouse-Gann, R., Griffiths, C., Zuël, N. & Cole, N., 2022, Conservation Translocations. Cambridge University Press, p. 469-475
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedSoil bacterial and fungal communities show within field heterogeneity that varies by land management and distance metric
Seaton, F. M., Griffiths, R. I., Goodall, T., Lebron, I. & Norton, L. R., 27 Jul 2022, BioRxiv, p. 2022.07.26.501510, (bioRxiv).
Research output: Working paper › Preprint
- PublishedStrategies for sample labelling and library preparation in DNA metabarcoding studies
Bohmann, K., Elbrecht, V., Caroe, C., Bista, I., Leese, F., Bunce, M., Yu, D. W., Seymour, M., Dumbrell, A. & Creer, S., May 2022, In: Molecular Ecology Resources. 22, 4, p. 1231-1246 16 p.
Research output: Contribution to journal › Review article › peer-review
- PublishedSustainable futures over the next decade are rooted in soil science
Evans, D. L., Janes-Bassett, V., Borrelli, P., Chenu, C., Ferreira, C. S. S., Griffiths, R. I., Kalantari, Z., Keesstra, S., Lal, R., Panagos, P., Robinson, D. A., Seifollahi-Aghmiuni, S., Smith, P., Steenhuis, T. S., Thomas, A. & Visser, S. M., 19 Jan 2022, In: European Journal of Soil Science. 73, 1, p. e13145
Research output: Contribution to journal › Article › peer-review
- PublishedTackling Snakebite Through Training: an Indian example
Malhotra, A., Graham, S., Owens, J. B., Bharti, O. & Santra, V., 31 Aug 2022, In: Herpetological Conservation and Biology. 17, 2, p. 331–342
Research output: Contribution to journal › Article › peer-review
- PublishedTemporal Patterns of Honeybee Foraging in a Diverse Floral Landscape Revealed Using Pollen DNA Metabarcoding of Honey
Jones, L., Lowe, A., Ford, C. R., Creer, S. & de Vere, N., 1 Aug 2022, In: Integrative and Comparative Biology. 62, 2, p. 199-210
Research output: Contribution to journal › Article › peer-review
- PublishedTemporal change in floral availability leads to periods of resource limitation and affects diet specificity in a generalist pollinator
Lowe, A., Jones, L., Brennan, G., Creer, S., Christie, L. & de Vere, N., 24 Oct 2022, In: Molecular Ecology. 32, 23, p. 6363-6376 14 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe Evolution of Phage - Phage Cartoon by Ellie Jameson
Jameson, E., 1 Mar 2022, In: PHAGE (New Rochelle, N.Y.). 3, 1, p. 5
Research output: Contribution to journal › Article
- PublishedThe benefits of contributing to the citizen science platform iNaturalist as an identifier
Callaghan, C. T., Mesaglio, T., Asher, J. S., Brooks, T. M., Cabras, A. A., Chandler, M., Cornwell, W. K., Ríos-Málaver, I. C., Dankowicz, E., Dhiya'ulhaq, N. U., Fuller, R. A., Galindo-Real, C., Grattarola, F., Hewitt, S., Higgins, L., Hitchcock, C., Hung, K-L. J., Iwane, T., Kahumbu, P., Kendrick, R., Kieschnick, S. R., Kunz, G., Lee, C. C., Lin, C-T., Loarie, S., Medina, M. N., McGrouther, M. A., Miles, L., Modi, S., Nowak, K., Oktaviani, R., Waswala Olewe, B. M., Pagé, J., Petrovan, S., saari, C., Seltzer, C. E., Seregin, A. P., Sullivan, J. J., Sumanapala, A. P., Takoukam, A., Widness, J., Willmott, K., Wüster, W. & Young, A. N., 10 Nov 2022, In: PLoS Biology. 20, 11, p. e3001843 6 p., e3001843.
Research output: Contribution to journal › Article › peer-review
- PublishedThe interactions and hierarchical effects of long-term agricultural stressors on soil bacterial communities
Mombrikotb, S. B., Van Agtmaal, M., Johnstone, E., Crawley, M. J., Gweon, H. S., Griffiths, R. I. & Bell, T., 1 Oct 2022, In: Environmental Microbiology Reports. 14, 5, p. 711-718
Research output: Contribution to journal › Article › peer-review
- PublishedThe missing link in biogeographic reconstruction: Accounting for lineage extinction rewrites history
Herrera‐Alsina, L., Algar, A. C., Lancaster, L. T., Ornelas, J. F., Bocedi, G., Papadopulos, A. S. T., Gubry-Rangin, C., Osborne, O., Mynard, P., Sudiana, I. M., Lupiyaningdyah, P., Juliandi, B. & Travis, J., Nov 2022, In: Journal of Biogeography. 49, 11, p. 1941-1951 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe supplementation of a prebiotic improves the microbial community in the gut and the skin of Atlantic salmon (Salmo salar)
Baumgärtner, S., James, J. & Ellison, A., 1 Aug 2022, In: Aquaculture Reports. 25, 101204.
Research output: Contribution to journal › Article › peer-review
- PublishedToxic habits: an analysis of general trends and biases in snake venom research
Avella, I., Wüster, W., Luiselli, L. & Martínez-Freiría, F., 17 Dec 2022, In: Toxins. 14, 12, p. 884 17 p., 884.
Research output: Contribution to journal › Review article › peer-review
- PublishedUnderstanding and tackling snakebite envenoming with transdisciplinary research
Guttierrez, J. M., Borri, J., Giles-Vernick, T., Duda, R., Habib, A. G., Malhotra, A., Martin, G., Pintor, A. F. V., Potet, J., Scott, T., Bolon, I. & de Castaneda, R. R., 17 Nov 2022, In: PLoS Neglected Tropical Diseases. 16, 11, p. e0010897 e0010897.
Research output: Contribution to journal › Article › peer-review
- PublishedUsing DNA Metabarcoding to Identify Floral Visitation by Pollinators
Lowe, A., Jones, L., Witter, L., Creer, S. & de Vere, N., 24 Mar 2022, In: Diversity. 14, 4
Research output: Contribution to journal › Review article › peer-review
- PublishedUsing a systematic approach to synthesize existing knowledge on Gymnopus fusipes ( syn . Collybia fusipes ), the cause of Collybia root rot
Pettifor, B., McDonald, J. & Denman, S., Oct 2022, In: Forest Pathology. 52, 5, p. 1 - 14 e12766.
Research output: Contribution to journal › Review article › peer-review
- PublishedUtilizing Snake Rescue Data For Understanding Snake-Human Conflict
Kuttalam, S. R., Santra, V., Das, B., Koley, A., Dhara, A., Owens, J. B., Barlow, A. & Malhotra, A., 19 Nov 2022.
Research output: Contribution to conference › Poster
- PublishedWhole genome resequencing data enables a targeted SNP panel for conservation and aquaculture of Oreochromis cichlid fishes
Ciezarek, A., Ford, A. G. P., Etherington, G. J., Kasozi, N., Malinsky, M., Mehta, T. K., Penso-Dolfin, L., Ngatunga, B. P., Shechonge, A., Tamatamah, R., Haerty, W., Palma, F. D., Genner, M. J. & Turner, G. F., 15 Feb 2022, In: Aquaculture. 548, Part 2, p. 737637 737637.
Research output: Contribution to journal › Article › peer-review
- PublishedWidespread introgression across a phylogeny of 155 Drosophila genomes
Suvorov, A., Kim, B. Y., Wang, J., Armstrong, E. E., Peede, D., D'Agostino, E. R. R., Price, D. K., Waddell, P., Lang, M., Courtier-Orgogozo, V., David, J. R., Petrov, D., Matute, D. R., Schrider, D. R. & Comeault, A., 10 Jan 2022, In: Current Biology. 32, 1, p. 111-123
Research output: Contribution to journal › Article › peer-review
- PublishedX chromosomes show relaxed selection and complete somatic dosage compensation across Timema stick insect species
Parker, D., Jaron, K. S., Dumas, Z., Robinson-Rechavi, M. & Schwander, T., 7 Aug 2022, In: Journal of Evolutionary Biology.
Research output: Contribution to journal › Article › peer-review
2021
- PublishedA genome-wide investigation of adaptive signatures in protein-coding genes related to tool behaviour in New Caledonian and Hawaiian crows
Dussex, N., Kutschera, V. E., Wiberg, R. A. W., Parker, D. J., Hunt, G. R., Gray, R. D., Rutherford, K., Abe, H., Fleischer, R. C., Ritchie, M. G., Rutz, C., Wolf, J. B. W. & Gemmell, N. J., 1 Feb 2021, In: Molecular Ecology. 30, 4, p. 973-986 14 p.
Research output: Contribution to journal › Article › peer-review
- PublishedAdvances in Venomous Snake Systematics, 2009–2019
Wüster, W., 25 May 2021, Handbook of Venoms and Toxins of Reptiles, Second Edition. Mackessy, S. P. (ed.). Boca Raton: Taylor & Francis, p. 123-145 23 p.
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedAn evaluation of the nomina for death adders (Acanthophis Daudin, 1803) proposed by Wells & Wellington (1985), and confirmation of A. cryptamydros Maddock et al., 2015 as the valid name for the Kimberley death adder
Ellis, R. J., Kaiser, H., Maddock, S., Doughty, P. & Wüster, W., 29 Jun 2021, In: Zootaxa. 4995, 1, p. 161–172 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedAncient geological dynamics impact neutral biodiversity accumulation and are detectable in phylogenetic reconstructions
Herrera‐Alsina, L., Algar, A. C., Bocedi, G., Gubry‐Rangin, C., Lancaster, L., Mynard, P., Osborne, O., Papadopulos, A. S. T., Creer, S., Nangoy, M., Fahri, F., Lupiyaningdyah, P., Sudiana, I. M., Juliandi, B. & Travis, J. M. J., Aug 2021, In: Global Ecology and Biogeography. 30, 8, p. 1633-1642 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedAnimals, protists and bacteria share marine biogeographic patterns
Holman, L. E., De Bruyn, M., Creer, S., Carvalho, G., Robidart, J. & Rius, M., 1 Jun 2021, In: Nature Ecology and Evolution. 5, 6, p. 738–746
Research output: Contribution to journal › Article › peer-review
- PublishedAstatotilapia species (Teleostei, Cichlidae) from Malawi, Mozambique and Tanzania, excluding the basin of Lake Victoria
Turner, G., Ngatunga, B. P. & Genner, M. J., 2021, 107 p. EcoEvoRxiv.
Research output: Other contribution
- PublishedBacterial biota of forest trees
Pettifor, B. & McDonald, J., Aug 2021, Forest Microbiology: Tree Microbiome: Phyllosphere, Endosphere and Rhizosphere. Asiegbu, F. O. & Kovalchuk, A. (eds.). 1 ed. Academic Press, Elsevier, Vol. 1. p. 161 - 173 12 p.
Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
- PublishedBeyond Taxonomic Identification: Integration of Ecological Responses to a Soil Bacterial 16S rRNA Gene Database
Jones, B., Goodall, T., George, P. B. L., Gweon, H. S., Puissant, J., Read, D. S., Emmett, B., Robinson, D. A., Jones, D. L. & Griffiths, R. I., 19 Jul 2021, In: Frontiers in Microbiology. 12, 682886.
Research output: Contribution to journal › Article › peer-review
- PublishedChemical defence effective against multiple enemies: Does the response to conspecifics alleviate the response to predators?
Uveges, B., Basson, A. C., Moricz, A. M., Bokony, V. & Hettyey, A., Oct 2021, In: Functional Ecology. 35, 10, p. 2294-2304
Research output: Contribution to journal › Article › peer-review
- PublishedCircadian dynamics of the teleost skin immune-microbiome interface
Ellison, A., Wilcockson, D. & Cable, J., 16 Nov 2021, In: Microbiome. 9, 1, 18 p., 222.
Research output: Contribution to journal › Article › peer-review
- PublishedCitizen science and online data: Opportunities and challenges for snake ecology and action against snakebite
Durso, A. M., Ruiz de Castañeda, R., Montalcini, C., Mondardini, M. R., Fernandez-Marquez, J. L., Grey, F., Müller, M. M., Uetz, P., Marshall, B., Gray, R. J., Smith, C. E., Becker, D., Pingleton, M., Louies, J., Abegg, A. D., Akuboy, J., Alcoba, G., Daltry, J. C., Entiauspe-Neto, O. M., Freed, P., de Freitas, M. A., Glaudas, X., Huang, S., Huang, T., Kalki, Y., Kojima, Y., Laudisoit, A., Limbu, K. P., Martínez-Fonseca, J. G., Mebert, K., Rödel, M. O., Ruane, S., Ruedi, M., Schmitz, A., Tatum, S. A., Tillack, F., Visvanathan, A., Wüster, W. & Bolon, I., 1 Jul 2021, In: Toxicon: X. 9-10, 19 p., 100071.
Research output: Contribution to journal › Article › peer-review
- PublishedClimate change alters temporal dynamics of alpine soil microbial functioning and biogeochemical cycling via earlier snowmelt
Broadbent, A. A. D., Snell, H. S. K., Michas, A., Pritchard, W. J., Newbold, L., Cordero, I., Goodall, T., Schallhart, N., Kaufmann, R., Griffiths, R. I., Schloter, M., Bahn, M. & Bardgett, R. D., Aug 2021, In: The ISME Journal. 15, 8, p. 2264-2275 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedComparison of greenhouse gas fluxes from tropical forests and oil palm plantations on mineral soil
Drewer, J., Leduning, M. M., Griffiths, R. I., Goodall, T., Levy, P. E., Cowan, N., Comynn-Platt, E., Hayman, G., Sentian, J., Majalap, N. & Skiba, U. M., 4 Mar 2021, In: Biogeosciences. 18, 5, p. 1559-1575 17 p.
Research output: Contribution to journal › Article › peer-review
- PublishedComplex target SELEX-based identification of DNA aptamers against Bungarus caeruleus venom for the detection of envenomation using a paper-based device
Anand, A., Chatterjee, B., Dhiman, A., Goel, R., Khan, E., Malhotra, A., Santra, V., Salvi, N., Bhatnagar, I., Kumar, A., Asthana, A. & Sharma, T. K., 1 Dec 2021, In: Biosensors and Bioelectronics. 193, 113523.
Research output: Contribution to journal › Article › peer-review
- PublishedComponent Parts of Bacteriophage Virions Accurately Defined by a Machine-Learning Approach Built on Evolutionary Features
Thung, T. Y., White, M. E., Dai, W., Wilksch, J. J., Bamert, R. S., Rocker, A., Stubenrauch, C. J., Williams, D., Huang, C., Schittelhelm, R., Barr, J. J., Jameson, E., McGowan, S., Zhang, Y., Wang, J., Dunstan, R. A. & Lithgow, T., 29 Jun 2021, In: mSystems. 6, 3, e0024221.
Research output: Contribution to journal › Article › peer-review
- PublishedConcentration and Quantification of SARS-CoV-2 RNA in Wastewater Using Polyethylene Glycol-Based Concentration and qRT-PCR.(vol 4, 17, 2021)
Farkas, K., Hillary, L. S., Thorpe, J., Walker, D. I., Lowther, J. A., McDonald, J. E., Malham, S. K. & Jones, D. L., 12 Nov 2021, In: Methods and Protocols. 4, 4
Research output: Contribution to journal › Article › peer-review
- PublishedConcentration and quantification of SARS-CoV-2 RNA in wastewater using polyethylene glycol-based concentration and qRT-PCR
Farkas, K., Hillary, L., Thorpe, J., Walker, D., Lowther, J. A., McDonald, J., Malham, S. & Jones, D. L., 23 Feb 2021, In: Methods and Protocols. 4, 1, 10 p., 17.
Research output: Contribution to journal › Article › peer-review
- PublishedConfronting taxonomic vandalism in biology: conscientious community self-organization can preserve nomenclatural stability
Wüster, W., Thomson, S. A., O'Shea, M. & Kaiser, H., Jul 2021, In: Biological Journal of the Linnean Society. 133, 3, p. 645–670 26 p.
Research output: Contribution to journal › Article › peer-review
- PublishedConnecting high‐throughput biodiversity inventories: Opportunities for a site‐based genomic framework for global integration and synthesis
Arribas, P., Andujar, C., Bidartondo, M. I., Bohmann, K., Coissac, E., Creer, S., deWaard, J. R., Elbrecht, V., Ficetola, G. F., Goberna, M., Kennedy, S., Krehenwinkel, H., Leese, F., Novotny, V., Ronquist, F., Yu, D. W., Zinger, L., Creedy, T. J., Meramveliotakis, E., Noguerales, V., Overcast, I., Morlon, H., Vogler, A. P., Papadopoulou, A. & Emerson, B. C., 1 Mar 2021, In: Molecular Ecology. 30, 5, p. 1120-1135 16 p.
Research output: Contribution to journal › Article › peer-review
- PublishedConvergent evolution of pain-inducing defensive venom components in spitting cobras
Kazandjian, T. D., Petras, D., Robinson, S. D., van Thiel, J., Greene, H. W., Arbuckle, K., Barlow, A., Carter, D. A., Wouters, R., Whiteley, G., Wagstaff, S. C., Arias, A. S., Albulescu, L. O., Plettenberg Laing, A., Hall, C., Heap, A., Penrhyn-Lowe, S., McCabe, C. V., Ainsworth, S., da Silva, R. R., Dorrestein, P. C., Richardson, M. K., Gutiérrez, J. M., Calvete, J. J., Harrison, R. A., Vetter, I., Undheim, E. A. B., Wüster, W. & Casewell, N. R., 22 Jan 2021, In: Science. 371, 6527, p. 386-390 5 p.
Research output: Contribution to journal › Article › peer-review
- PublishedCrowdsourcing snake identification with online communities of professional herpetologists and avocational snake enthusiasts
Durso, A. M., Bolon, I., Kleinhesselink, A. R., Mondardini, M. R., Fernandez-Marquez, J. L., Gutsche-Jones, F., Gwilliams, C., Tanner, M., Smith, C. E., Wüster, W., Grey, F. & Ruiz de Castañeda, R., 13 Jan 2021, In: Royal Society Open Science. 8, 1, 21 p., 201273.
Research output: Contribution to journal › Article › peer-review
- PublishedDNA Metabarcoding Methods for the Study of Marine Benthic Meiofauna
Gielings, R., Fais, M., Fontaneto, D., Creer, S., Costa, F. O., Renema, W. & Macher, J-N., 30 Sept 2021, In: Frontiers in Marine Science.
Research output: Contribution to journal › Article › peer-review
- PublishedDecoupled richness of generalist anaerobes and sulphate-reducing bacteria is driven bypHacross land uses in temperate soils
George, P. B. L., Coelho, K. P., Creer, S., Lebron, I., Robinson, D. A. & Jones, D. L., Nov 2021, In: European Journal of Soil Science. 72, 6, p. 2445-2456 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedDepletion of MHC supertype during domestication can compromise immunocompetence
Smallbone, W., Ellison, A., Poulton, S., van Oosterhout, C. & Cable, J., Feb 2021, In: Molecular Ecology. 30, 3, p. 736-746
Research output: Contribution to journal › Article › peer-review
- PublishedDifferential use of multiple genetic sex determination systems in divergent ecomorphs of an African crater lake cichlid
Munby, H., Linderoth, T., Fischer, B., Du, M., Vernaz, G., Tyers, A. M., Ngatunga, B. P., Shechonge, A., Denise, H., McCarthy, S. A., Bista, I., Miska, E. A., Emilia Santos, M., Genner, M. J., Turner, G. F. & Durbin, R., 6 Aug 2021, BioRxiv, (bioRxiv).
Research output: Working paper › Preprint
- PublishedDomestication-induced reduction in eye size revealed in multiple common garden experiments: The case of Atlantic salmon (Salmo salar L.)
Perry, W. B., Kaufmann, J., Solberg, M. F., Brodie, C., Medina, A. M. C., Pillay, K., Egerton, A., Harvey, A., Phillips, K. P., Coughlan, J., Egan, F., Grealis, R., Hutton, S., Leseur, F., Ryan, S., Poole, R., Rogan, G., Ryder, E., Schaal, P., Waters, C., Wynne, R., Taylor, M., Prodohl, P., Creer, S., Llewellyn, M., McGinnity, P., Carvalho, G. & Glover, K. A., 28 Sept 2021, In: Evolutionary Applications. 14, 9, p. 2319-2332 14 p.
Research output: Contribution to journal › Article › peer-review
- PublishedE. coli Is a Poor End-Product Criterion for Assessing the General Microbial Risk Posed From Consuming Norovirus Contaminated Shellfish
Sharp, J. H., Clements, K., Diggens, M., McDonald, J. E., Malham, S. K. & Jones, D. L., 19 Feb 2021, In: Frontiers in Microbiology. 12, p. 608888
Research output: Contribution to journal › Article › peer-review
- PublishedEcosystems monitoring powered by environmental genomics: a review of current strategies with an implementation roadmap
Cordier, T., Alonso-Saez, L., Apothéloz-Perret-Gentil, Aylagas, E., Bohan, D. A., Bouchez, A., Chariton, A. A., Creer, S., Fruhe, L., Keck, F., Keeley, N., Laroche, O., Leese, F., Pochon, X., Stoeck, T., Pawlowski, J. & Lanzen, A., Jul 2021, In: Molecular Ecology. 30, 13, p. 2937-2958 22 p.
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental DNA monitoring of oncogenic viral shedding and genomic profiling of sea turtle fibropapillomatosis reveals unusual viral dynamics
Farrell, J. A., Yetsko, K., Whitmore, L., Whilde, J., Eastman, C. B., Ramia, D. R., Thomas, R., Linser, P., Creer, S., Burkhalter, B., Schnitzler, C. & Duffy, D. J., 12 May 2021, In: Communications Biology. 4, 1, p. 565 1 p.
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental DNA provides higher resolution assessment of riverine biodiversity and ecosystem function via spatio-temporal nestedness and turnover partitioning
Seymour, M., Edwards, F. K., Cosby, B. J., Bista, I., Scarlett, P. M., Brailsford, F., Glanville, H., de Bruyn, M., Carvalho, G. & Creer, S., 3 May 2021, In: Communications Biology. 4, 1, 512.
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental DNA reveals links between abundance and composition of airborne grass pollen and respiratory health
Rowney, F. M., Brennan, G. L., Skjoth, C. A., Griffith, G. W., McInnes, R. N., Clewlow, Y., Adams-Groom, B., Barber, A., De Vere, N., Economou, T., Hegarty, M., Hanlon, H. M., Jones, L., Kurganskiy, A., Petch, G. M., Potter, C., Munawar Rafiq, A., Warner, A., The PollerGEN Consortium, Wheeler, B. W., Osborne, N. J. & Creer, S., 10 May 2021, In: Current Biology. 31, 9, p. 1995-2003 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedFirst annotated draft genomes of nonmarine ostracods (Ostracoda, Crustacea) with different reproductive modes
Tran Van, P., Anselmetti, Y., Bast, J., Dumas, Z., Galtier, N., Jaron, K. S., Martens, K., Parker, D. J., Robinson-Rechavi, M., Schwander, T., Simion, P. & Schön, I., 15 Apr 2021, In: G3: Genes, Genomes, Genetics. 11, 4
Research output: Contribution to journal › Article › peer-review
- PublishedGenome-wide data implicate terminal fusion automixis in king cobra facultative parthenogenesis.
Card, D. C., Vonk, F. J., Smallbrugge, S., Casewell, N. R., Wüster, W., Castoe, T. A., Schuett, G. W. & Booth, W., 31 Mar 2021, In: Scientific Reports. 11, 1, 9 p., 7271.
Research output: Contribution to journal › Article › peer-review
- PublishedGenomic signatures of admixture and selection are shared among populations of Zaprionus indianus across the western hemisphere
Comeault, A., Kautt, A. F. & Matute, D. R., Dec 2021, In: Molecular Ecology. 30, 23, p. 6193-6210 18 p.
Research output: Contribution to journal › Article › peer-review
- PublishedGeographical structure of genetic diversity in Loudetia simplex (Poaceae) in Madagascar and South Africa
Hagl, P. A., Gargiulo, R., Fay, M. F., Solofondranohatra, C., Salmona, J., Suescun, U., Rakotomalala, N., Lehmann, C. E. R., Besnard, G., Papadopulos, A. S. T. & Vorontsova, M. S., 15 Apr 2021, In: Botanical Journal of the Linnean Society. 196, 1, p. 81-99 19 p.
Research output: Contribution to journal › Article › peer-review
- PublishedHaplotype divergence supports long-term asexuality in the oribatid mite Oppiella nova
Brandt, A., Tran Van, P., Bluhm, C., Anselmetti, Y., Dumas, Z., Figuet, E., François, C. M., Galtier, N., Heimburger, B., Jaron, K. S., Labédan, M., Maraun, M., Parker, D. J., Robinson-Rechavi, M., Schaefer, I., Simion, P., Scheu, S., Schwander, T. & Bast, J., 21 Sept 2021, In: Proceedings of the National Academy of Sciences of the United States of America. 118, 38
Research output: Contribution to journal › Article › peer-review
- PublishedHigh throughput shotgun sequencing of eRNA reveals taxonomic and derived functional shifts across a benthic productivity gradient
Broman, E., Bonaglia, S., Norkko, A., Creer, S. & Nascimento, F. J. A., Jul 2021, In: Molecular Ecology. 30, 13, p. 3023-3039 17 p.
Research output: Contribution to journal › Article › peer-review
- PublishedHighly contiguous assemblies of 101 drosophilid genomes
Kim, B. Y., Wang, J., Miller, D. E., Barmina, O., Delaney, E. K., Thompson, A., Comeault, A., Peede, D., D'Agostino, E. R., Pelaez, J., Aguilar, J. M., Haji, D., Matsunaga, T., Armstrong, E., Zych, M., Ogawa, Y., Stamenković-Radak, M., Jelić, M., Savić Veselinović, M., Tanasković, M., Erić, P., Gao, J-J., Katoh, T. K., Toda, M. J., Watabe, H., Watada, M., Davis, J. S., Moyle, L., Manoli, G., Bertolini, E., Koštál, V., Hawley, R. S., Takahashi, A., Jones, C. D., Price, D. K., Whiteman, N. K., Kopp, A., Matute, D. R. & Petrov, D. A., 19 Jul 2021, In: Elife. 10, e66405.
Research output: Contribution to journal › Article › peer-review
- PublishedImproving quantification of bivalve larvae in mixed plankton samples using qPCR: A case study on Mytilus edulis
Alexander, J., Malham, S., Smyth, D., Webb, J., Fidler, D., Bayford, P., McDonald, J. & Le Vay, L., 15 Feb 2021, In: Aquaculture. 532, 736003.
Research output: Contribution to journal › Article › peer-review
- PublishedIsolation and Characterization of Klebsiella Phages for Phage Therapy
Townsend, E. M., Kelly, L., Gannon, L., Muscatt, G., Dunstan, R., Michniewski, S., Sapkota, H., Kiljunen, S. J., Kolsi, A., Skurnik, M., Lithgow, T., Millard, A. D. & Jameson, E., 17 Mar 2021, In: PHAGE (New Rochelle, N.Y.). 2, 1, p. 26-42 17 p.
Research output: Contribution to journal › Article › peer-review
- PublishedKing or royal family? Testing for species boundaries in the King Cobra, Ophiophagus hannah (Cantor, 1836), using morphology and multilocus DNA analyses
Gowri Shankar, P., Swamy, P., Williams, R. C., Ganesh, S. R., Moss, M., Höglund, J., Das, I., Sahoo, G., Vijayakumar, S. P., Shanker, K., Wüster, W. & Dutta, S. K., Dec 2021, In: Molecular Phylogenetics and Evolution. 165, 107300, 63 p., 107300.
Research output: Contribution to journal › Article › peer-review
- PublishedLoss of Ice Cover, Shifting Phenology, and More Extreme Events in Northern Hemisphere Lakes
Sharma, S., Richardson, D. C., Woolway, R. I., Imrit, M. A., Bouffard, D., Blagrave, K., Daly, J., Filazzola, A., Granin, N., Korhonen, J., Magnuson, J., Marszelewski, W., Matsuzaki, S-I. S., Perry, W., Robertson, D. M., Rudstam, L. G., Weyhenmeyer, G. A. & Yao, H., 1 Oct 2021, In: Journal of Geophysical Research: Biogeosciences. 126, 10, e2021JG006348.
Research output: Contribution to journal › Article › peer-review
- PublishedMapping epigenetic divergence in the massive radiation of Lake Malawi cichlid fishes
Vernaz, G., Malinsky, M., Svardal, H., Du, M., Tyers, A. M., Santos, M. E., Durbin, R., Genner, M. J., Turner, G. F. & Miska, E. A., 7 Oct 2021, In: Nature Communications. 12, 1, 5870.
Research output: Contribution to journal › Article › peer-review
- PublishedMarine artificial light at night: An empirical and technical guide
Tidau, S., Smyth, T., McKee, D., Wiedenmann, J., D'Angelo, C., Wilcockson, D., Ellison, A., Grimmer, A., Jenkins, S., Widdicombe, S., de Moura Queiros, A., Talbot, E., Wright, A. & Davies, T., Sept 2021, In: Methods in Ecology and Evolution. 12, 9, p. 1588-1601
Research output: Contribution to journal › Article › peer-review
- PublishedMolecular Clocks and Archeogenomics of a Late Period Egyptian Date Palm Leaf Reveal Introgression from Wild Relatives and Add Timestamps on the Domestication
Pérez-Escobar, O. A., Bellott, S., Przelomska, N. A. S., Flowers, J. M., Nesbitt, M., Ryan, P., Gutaker, R. M., Gros-Balthazard, M., Wells, T., Kuhnhäuser, B. G., Schley, R., Bogarin, D., Dodsworth, S., Diaz, R., Lehmann, M., Petoe, P., Eiserhardt, W. L., Preick, M., Hofreiter, M., Hajdas, I., Purugganan, M., Antonelli, A., Gravendeel, B., Leitch, I. J., Jimenez, M. F. T., Papadopulos, A. S. T., Chomicki, G., Renner, S. S. & Baker, W. J., Oct 2021, In: Molecular Biology and Evolution. 38, 10, p. 4475-4492 18 p., msab188.
Research output: Contribution to journal › Article › peer-review
- PublishedMolecular characterization of a marine turtle tumor epizootic, profiling external, internal and postsurgical regrowth tumors
Yetsko, K., Farrell, J., Blackburn, N. B., Whitmore, L., Stammnitz, M. R., Whilde, J., Eastman, C., Ramia, D. R., Thomas, R., Krstic, A., Linser, P., Creer, S., Carvalho, G., Devlin, M. A., Nahvi, N., Leandro, A. C., deMaar, T. W., Burkhalter, B., Murchison, E. P., Schnitzler, C. & Duffy, D., 1 Feb 2021, In: Communications Biology. 4, 1, 152.
Research output: Contribution to journal › Article › peer-review
- PublishedMolecular phylogenetic analysis of the genus Gloydius (Squamata, Viperidae, Crotalinae), with description of two new alpine species from Qinghai-Tibet Plateau, China
Shi, J-S., Liu, J-C., Giri, R., Owens, J. B., Santra, V., Kuttalam, S. R., Selvan, M., Guo, K-J. & Malhotra, A., 4 Oct 2021, In: ZooKeys. 1061, 1061, p. 87-108 22 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMonitoring SARS-CoV-2 in municipal wastewater to evaluate the success of lockdown measures for controlling COVID-19 in the UK
Hillary, L. S., Farkas, K., Maher, K. H., Lucaci, A., Thorpe, J., Distaso, M. A., Gaze, W. H., Paterson, S., Burke, T., Connor, T. R., McDonald, J. E., Malham, S. K. & Jones, D. L., 15 Jul 2021, In: Water Research. 200, p. 117214 1 p.
Research output: Contribution to journal › Article › peer-review
- PublishedNewly discovered cichlid fish biodiversity threatened by hybridization with non-native species
Blackwell, T., Ford, A. G. P., Ciezarek, A. G., Bradbeer, S. J., Gracida Juarez, C. A., Smith, A. M., Ngatunga, B. P., Shechonge, A., Tamatamah, R., Etherington, G., Haerty, W., Di Palma, F., Turner, G. F. & Genner, M. J., Feb 2021, In: Molecular Ecology. 30, 4, p. 895-911 17 p.
Research output: Contribution to journal › Article › peer-review
- PublishedPasture age impacts soil fungal composition while bacteria respond to soil chemistry
Seaton, F. M., Griffiths, R. I., Goodall, T., Lebron, I. & Norton, L. R., 15 Sept 2021, (bioRxiv).
Research output: Working paper › Preprint
- PublishedPredicting the severity of the grass pollen season and the effect of climate change in Northwest Europe
Kurganskiy, A., Creer, S., De Vere, N., Griffith, G. W., Osborne, N. J., Wheeler, B. W., McInnes, R. N., Clewlow, Y., Barber, A., Brennan, G., Hanlon, H. M., Hegarty, M. J., Potter, C., Rowney, F. M., Adams-Groom, B., Petch, G. M., Pashley, C. H., Satchwell, J., De Weger, L. A., Rasmussen, K., Oliver, G., Sindt, C., Bruffaerts, N., The PollerGEN Consortium & Skjoth, C. A., 26 Mar 2021, In: Science Advances. 7, 13, eabd7658.
Research output: Contribution to journal › Article › peer-review
- PublishedPromoting co-existence between humans and venomous snakes through increasing the herpetological knowledge base
Malhotra, A., Wüster, W., Owens, J. B., Hodges, C. W., Jesudasan, A., Ch, G., Kartik, A., Christopher, P., Louies, J., Naik, H., Santra, V., Kuttalam, S. R., Attre, S., Sasa, M., Bravo-Vega, C. & Murray, K. A., 1 Nov 2021, In: Toxicon: X. 12, November 2021, 18 p., 10081.
Research output: Contribution to journal › Article › peer-review
- PublishedRapid Parallel Adaptation to Anthropogenic Heavy Metal Pollution
Papadopulos, A. S. T., Helmstetter, A. J., Osborne, O., Comeault, A., Wood, D., Straw, E. A., Mason, L., Fay, M. F., Parker, J., Dunning, L. T., Foote, A., Smith, R. J. & Lighten, J., Sept 2021, In: Molecular Biology and Evolution. 38, 9, p. 3724-3736 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedRare morph Lake Malawi mbuna cichlids benefit from reduced aggression from con- and hetero-specifics
Tyers, A. M., Cooke, G. M. & Turner, G. F., Nov 2021, In: Journal of Evolutionary Biology. 34, 11, p. 1678-1690 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSaprolegnia parasitica zoospore activity and host survival indicates isolate variation in host preference
Matthews, E., Ellison, A. & Cable, J., Apr 2021, In: Fungal Biology. 125, 4, p. 260-268
Research output: Contribution to journal › Article › peer-review
- PublishedSex-specific responses to cold in a very cold-tolerant, northern Drosophila species
Parker, D. J., Envall, T., Ritchie, M. G. & Kankare, M., 1 Apr 2021, In: Heredity. 126, 4, p. 695-705 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedShifts in Soil Structure, Biological, and Functional Diversity Under Long-Term Carbon Deprivation
George, P. B. L., Fidler, D. B., Van Nostrand, J. D., Atkinson, J. A., Mooney, S. J., Creer, S., Griffiths, R. I., McDonald, J. E., Robinson, D. A. & Jones, D. L., 14 Sept 2021, In: Frontiers in Microbiology. 12, 735022.
Research output: Contribution to journal › Article › peer-review
- PublishedShifts in honeybee foraging reveal historical changes in floral resources
Jones, L., Brennan, G. L., Lowe, A., Creer, S., Ford, C. R. & de Vere, N., 14 Jan 2021, In: Communications Biology. 4, 1, 37.
Research output: Contribution to journal › Article › peer-review
- PublishedShining a light on parasite behaviour: daily patterns of Argulus fish lice
Hunt, R., Cable, J. & Ellison, A., 1 Jun 2021, In: Parasitology. 148, 7, p. 850-856 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSoil health cluster analysis based on national monitoring of soil indicators
Seaton, F. M., Barrett, G., Burden, A., Creer, S., Fitos, E., Garbutt, A., Griffiths, R. I., Henrys, P., Jones, D. L., Keenan, P., Keith, A., Lebron, I., Maskell, L., Pereira, M. G., Reinsch, S., Smart, S. M., Williams, B., Emmett, B. A. & Robinson, D. A., Nov 2021, In: European Journal of Soil Science. 72, 6, p. 2414-2429 16 p.
Research output: Contribution to journal › Article › peer-review
- PublishedStructural basis of carnitine monooxygenase CntA substrate specificity, inhibition, and intersubunit electron transfer
Quareshy, M., Shanmugam, M., Townsend, E., Jameson, E., Bugg, T. D. H., Cameron, A. D. & Chen, Y., 23 Jan 2021, In: Journal of Biological Chemistry. 296, 100038.
Research output: Contribution to journal › Article › peer-review
- PublishedTaxonomy and nomenclature of the Pantherophis obsoletus complex
Hillis, D. M. & Wüster, W., 9 Mar 2021, In: Herpetological Review. 52, 1, p. 51-52 2 p.
Research output: Contribution to journal › Article › peer-review
- PublishedTemperature-dependent competitive outcomes between the fruit flies Drosophila santomea and Drosophila yakuba
Comeault, A. & Matute, D. R., Mar 2021, In: American Naturalist. 197, 3, p. 312-323 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe Human Gut Phageome Origins and Roles in the Human Gut Microbiome
Townsend, E. M., Kelly, L., Muscatt, G., Box, J. D., Hargraves, N., Lilley, D. & Jameson, E., 4 Jun 2021, In: Frontiers in cellular and infection microbiology. 11
Research output: Contribution to journal › Review article › peer-review
- PublishedThe Natural History of the Satellite Lakes of Lake Malawi
Turner, G., Ngatunga, B. P. & Genner, M. J., 2021, 131 p. EcoEvoRxiv.
Research output: Other contribution
- PublishedThe demographic history of Madagascan micro-endemics: have rare species always been rare?
Helmstetter, A. J., Cable, S., Rakotonasolo, F., Rabarijaona, R., Rakotoarinivo, M., Eiserhardt, W. L., Baker, W. J. & Papadopulos, A. S. T., 29 Sept 2021, In: Proceedings of the Royal Society B: Biological Sciences. 288, 1959, 20210957.
Research output: Contribution to journal › Article › peer-review
- PublishedThe effect of root-associated microbes on plant growth and chemical defence traits across two contrasted elevations
Formenti, L., Caggìa, V., Puissant, J., Goodall, T., Glauser, G., Griffiths, R. & Rasmann, S., 10 Jan 2021, In: Journal of Ecology. 109, 1, p. 38-50 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedTowards complete and error-free genome assemblies of all vertebrate species
Rhie, A., McCarthy, S. A., Fedrigo, O., Damas, J., Formenti, G., Koren, S., Uliano-Silva, M., Chow, W., Fungtammasan, A., Kim, J., Lee, C., Ko, B. J., Chaisson, M., Gedman, G. L., Cantin, L. J., Thibaud-Nissen, F., Haggerty, L., Bista, I., Smith, M., Haase, B., Mountcastle, J., Winkler, S., Paez, S., Howard, J., Vernes, S. C., Lama, T. M., Grutzner, F., Warren, W. C., Balakrishnan, C. N., Burt, D., George, J. M., Biegler, M. T., Iorns, D., Digby, A., Eason, D., Robertson, B., Edwards, T., Wilkinson, M., Turner, G., Meyer, A., Kautt, A. F., Franchini, P., Detrich, H. W., Svardal, H., Wagner, M., Naylor, G. J. P., Pippel, M., Malinsky, M., Mooney, M., Simbirsky, M., Hannigan, B. T., Pesout, T., Houck, M., Misuraca, A., Kingan, S. B., Hall, R., Kronenberg, Z., Sović, I., Dunn, C., Ning, Z., Hastie, A., Lee, J., Selvaraj, S., Green, R. E., Putnam, N. H., Gut, I., Ghurye, J., Garrison, E., Sims, Y., Collins, J., Pelan, S., Torrance, J., Tracey, A., Wood, J., Dagnew, R. E., Guan, D., London, S. E., Clayton, D. F., Mello, C. V., Friedrich, S. R., Lovell, P. V., Osipova, E., Al-Ajli, F. O., Secomandi, S., Kim, H., Theofanopoulou, C., Hiller, M., Zhou, Y., Harris, R. S., Makova, K. D., Medvedev, P., Hoffman, J., Masterson, P., Clark, K., Martin, F., Howe, K., Flicek, P., Walenz, B. P., Kwak, W., Clawson, H., Diekhans, M., Nassar, L., Paten, B., Kraus, R. H. S., Crawford, A. J., Gilbert, M. T. P., Zhang, G., Venkatesh, B., Murphy, R. W., Koepfli, K-P., Shapiro, B., Johnson, W. E., Di Palma, F., Marques-Bonet, T., Teeling, E. C., Warnow, T., Graves, J. M., Ryder, O. A., Haussler, D., O’Brien, S. J., Korlach, J., Lewin, H. A., Howe, K., Myers, E. W., Durbin, R., Phillippy, A. M. & Jarvis, E. D., 28 Apr 2021, In: Nature. 592, 7856, p. 737-746 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedTracing the fate of wastewater viruses reveals catchment-scale virome diversity and connectivity
Adriaenssens, E. M., Farkas, K., McDonald, J. E., Jones, D. L., Allison, H. E. & McCarthy, A. J., 15 Sept 2021, In: Water Research. 203
Research output: Contribution to journal › Article › peer-review
- PublishedUnexpected lack of specialisation in the flow properties of spitting cobra venom
Avella, I., Barajas-Ledesma, E., Casewell, N. R., Harrison, R. A., Rowley, P., Crittenden, E., Wüster, W., Castiglia, R., Holland, C. & van der Meijden, A., 7 Apr 2021, In: Journal of Experimental Biology. 224, 7, 11 p., jeb229229.
Research output: Contribution to journal › Article › peer-review
- PublishedWind of Change - Phage Cartoon by Ellie Jameson
Jameson, E., 1 Dec 2021, In: PHAGE (New Rochelle, N.Y.). 2, 4, p. 155
Research output: Contribution to journal › Article
2020
- PublishedA multiplex real‐time PCR assay enables simultaneous rapid detection and quantification of bacteria associated with acute oak decline
Crampton, B. G., Plummer, S., Kaczmarek, M., McDonald, J. & Denman, S., Sept 2020, In: Plant Pathology. 69, 7, p. 1301-1310 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedAncestral Hybridization Facilitated Species Diversification in the Lake Malawi Cichlid Fish Adaptive Radiation
Turner, G., Svardal, H., Quah, F. X., Malinsky, M., Ngatunga, B. P., Miska, E., Salzburger, W., Genner, M. & Durbin, R., 30 Apr 2020, In: Molecular Biology and Evolution. 37, 4, p. 1100-1113 14 p.
Research output: Contribution to journal › Article › peer-review
- PublishedApplication of ecological and evolutionary theory to microbiome community dynamics across systems
McDonald, J., Marchesi, J. R. & Koskella, B., 23 Dec 2020, In: Proceedings of the Royal Society B: Biological Sciences. 287, 1941, 20202886.
Research output: Contribution to journal › Article › peer-review
- PublishedCAUTI's next top model - Model dependent Klebsiella biofilm inhibition by bacteriophages and antimicrobials
Townsend, E. M., Moat, J. & Jameson, E., 1 Dec 2020, In: Biofilm. 2, 100038.
Research output: Contribution to journal › Article › peer-review
- PublishedChapter Ten - Informing marine spatial planning decisions with environmental DNA
Bani, A., De Brauwer, M., Creer, S., Dumbrell, A. J., Limmon, G., Jompa, J., von der Heyden, S. & Berger, M., 2020, In: Advances in Ecological Research. 62, p. 375-407
Research output: Contribution to journal › Article › peer-review
- PublishedComparative genetic stock structure in three species of commercially exploited Indo-Malay Carangidae (Teleosteii, Perciformes)
Jaafar, T. N. A. M., Taylor, M. I., Nor, S. A. M., de Bruyn, M. & Carvalho, G. R., 20 Feb 2020, In: Journal of Fish Biology. 96, 2, p. 337-349
Research output: Contribution to journal › Article › peer-review
- PublishedComparative transcriptomics reveal conserved impacts of rearing density on immune response of two important aquaculture species
Ellison, A., Uren Webster, T. M., Rodriguez-Barreto, D., Garcia de Leaniz, C., Consuegra, S., Orozco-terWengel, P. & Cable, J., Sept 2020, In: Fish and Shellfish Immunology. 104, p. 192-201
Research output: Contribution to journal › Article › peer-review
- PublishedConservation genomic analysis reveals ancient introgression and declining levels of genetic diversity in Madagascar's hibernating dwarf lemurs
Williams, R. C., Blanco, M. B., Poelstra, J. W., Hunnicutt, K. E., Comeault, A. & Yoder, A. D., Jan 2020, In: Heredity. 124, 1, p. 236-251
Research output: Contribution to journal › Article › peer-review
- PublishedCost of a deprived environment – increased intraspecific aggression and susceptibility to pathogen infections
Masud, N., Ellison, A., Pope, E. & Cable, J., 22 Oct 2020, In: Journal of Experimental Biology. 223, 20
Research output: Contribution to journal › Article › peer-review
- PublishedCrayfish plague affects juvenile survival and adult behaviour of invasive signal crayfish
Thomas, J. R., Robinson, C., Mrugała, A., Ellison, A., Matthews, E., Griffiths, S., Consuegra, S. & Cable, J., May 2020, In: Parasitology. 147, 6, p. 706-714
Research output: Contribution to journal › Article › peer-review
- PublishedDietary complexity and hidden costs of prey switching in a generalist top predator
Moorhouse-Gann, R., Kean, E., Parry, G., Valladares, S. & Chadwick, E., 1 Jul 2020, In: Ecology and Evolution. 10, 13, p. 6395–6408
Research output: Contribution to journal › Article › peer-review
- PublishedDisentangling the effects of sex, life history and genetic background in Atlantic salmon: growth, heart and liver under common garden conditions
Perry, W. B., Solberg, M. F., Brodie, C., Medina, A. C., Pillay, K. G., Egerton, A., Harvey, A., Creer, S., Llewellyn, M., Taylor, M., Carvalho, G. & Glover, K. A., 7 Oct 2020, In: Royal Society Open Science. 7, 10, 200811.
Research output: Contribution to journal › Article › peer-review
- PublishedEcological community dynamics: 20 years of moth sampling reveals the importance of generalists for community stability
Carvalho, G., Seymour, M., Brown, N., Wood, C., Goertz, S. & de Bruyn, M., 1 Dec 2020, In: Basic and Applied Ecology. 49, p. 34-44 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental and microbial controls on microbial necromass recycling, an important precursor for soil carbon stabilization
Buckeridge, K. M., Mason, K. E., McNamara, N. P., Ostle, N., Puissant, J., Goodall, T., Griffiths, R. I., Stott, A. W. & Whitaker, J., 22 Oct 2020, In: Communications Earth and Environment. 1, 1, 36.
Research output: Contribution to journal › Article › peer-review
- PublishedEnvisioning the future with 'compassionate conservation': An ominous projection for native wildlife and biodiversity
Callen, A., Hayward, M. W., Klop-Toker, K., Allen, B. L., Ballard, G., Beranek, C. T., Broekhuis, F., Bugir, C. K., Clarke, R. H., Clulow, J., Clulow, S., Daltry, J. C., Davies-Mostert, H. T., Di Blanco, Y. E., Dixon, V., Fleming, P. J. S., Howell, L. G., Kerley, G. I. H., Legge, S. M., Lenga, D. J., Major, T., Montgomery, R. A., Moseby, K., Meyer, N., Parker, D. M., Periquet, S., Read, J., Scanlon, R. J., Shuttleworth, C., Tamessar, C. T., Taylor, W. A., Tuft, K., Upton, R. M. O., Valenzuela, M., Witt, R. R. & Wuster, W., Jan 2020, In: Biological Conservation. 241, 108365.
Research output: Contribution to journal › Article › peer-review
- PublishedEpistatic regulation of growth in Atlantic salmon revealed: a QTL study performed on the domesticated-wild interface
Besnier, F., Solberg, M. F., Harvey, A., Carvalho, G., Bekkevold, D., Taylor, M. I., Creer, S., Nielsen, E. E., Skaala, O., Ayllon, F., Dahle, G. & Glover, K. A., 7 Feb 2020, In: BMC Genetics. 21, 1, 13.
Research output: Contribution to journal › Article › peer-review
- PublishedEvaluating taxonomic inflation: towards evidence-based species delimitation in Eurasian vipers (Serpentes: Viperinae)
Freitas, I., Ursenbacher, S., Mebert, K., Zinenko, O., Schweiger, S., Wüster, W., Brito, J. C., Crnobrnja-Isailović, J., Halpern, B., Fahd, S., Santos, X., Pleguezuelos, J. M., Joger, U., Orlov, N., Mizsei, E., Lourdais, O., Zuffi, M. A. L., Strugariu, A., Zamfirescu, Ş. R., Martínez-Solano, Í., Velo-Antón, G., Kaliontzopoulou, A. & Martínez-Freiría, F., 30 Jun 2020, In: Amphibia-Reptilia. 41, 3, p. 285-311 27 p.
Research output: Contribution to journal › Article › peer-review
- PublishedEvolution of diversity explains the impact of pre-adaptation of a focal species on the structure of a natural microbial community
Padfield, D., Vujakovic, A., Paterson, S., Griffiths, R., Buckling, A. & Hesse, E., 3 Sept 2020, In: The ISME Journal. 14, 11, p. 2877-2889 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedExecuting multi-taxa eDNA ecological assessment via traditional metrics and interactive networks
Seymour, M., Edwards, F., Cosby, B., Kelly, M., de Bruyn, M., Carvalho, G. & Creer, S., 10 Aug 2020, In: Science of the Total Environment. 729, 138801.
Research output: Contribution to journal › Article › peer-review
- PublishedFangs for the Memories? A Survey of Pain in Snakebite Patients Does Not Support a Strong Role for Defense in the Evolution of Snake Venom Composition
Ward-Smith, H., Naude, A., Arbuckle, K. & Wuster, W., 22 Mar 2020, In: Toxins. 12, 3, 19 p., 201.
Research output: Contribution to journal › Article › peer-review
- PublishedGene expression varies within and between enzootic and epizootic lineages of Batrachochytrium dendrobatidis (Bd) in the Americas
McDonald, C. A., Ellison, A., Toledo, L. F., James, T. Y. & Zamudio, K. R., Jan 2020, In: Fungal Biology. 124, 1, p. 34-43
Research output: Contribution to journal › Article › peer-review
- PublishedGenetic diversity and thermal performance in invasive and native populations of African fig flies
Comeault, A., Wang, J., Tittes, S., Isbell, K., Ingley, S., Hurlbert, A. & Matute, D., 28 Feb 2020, In: Molecular Biology and Evolution.
Research output: Contribution to journal › Article › peer-review
- PublishedHarnessing rhizosphere microbiomes for drought-resilient crop production
Vries, F. T. D., Griffiths, R. I., Knight, C. G., Nicolitch, O. & Williams, A., 17 Apr 2020, In: Science. 368, 6488, p. 270-274 5 p.
Research output: Contribution to journal › Article › peer-review
- PublishedHost–microbiota–insect interactions drive emergent virulence in a complex tree disease
Doonan, J., Broberg, M., Denman, S. & McDonald, J., 26 Aug 2020, In: Proceedings of the Royal Society B: Biological Sciences. 287, 1933, 20200956.
Research output: Contribution to journal › Article › peer-review
- PublishedImpact of Sediment Concentration on the Survival of Wastewater-Derived blaCTX-M-15-Producing E. coli, and the Implications for Dispersal into Estuarine Waters
Bashawri, Y. M. A., Robins, P., Jones, D. L., McDonald, J., Cooper, D. & Williams, P., 19 Oct 2020, In: International Journal of Environmental Research and Public Health. 17, 20, 15 p., 7608.
Research output: Contribution to journal › Article › peer-review
- PublishedInference of natural selection from ancient DNA
Dehasque, M., Ávila-Arcos, M. C., Díez‐del‐Molino, D., Fumagalli, M., Guschanski, K., Lorenzen, E., Malaspinas, A-S., Marques-Bonet, T., Martin, M. D., Murray, G., Papadopulos, A. S. T., Therkildsen, N. O., Wegmann, D., Dalén, L. & Foote, A., Apr 2020, In: Evolution Letters. 4, 2, p. 94-108 15 p.
Research output: Contribution to journal › Review article › peer-review
- PublishedInsights into aphid prey consumption by ladybirds: Optimising field sampling methods and primer design for High Throughput Sequencing
Ammann, L., Moorhouse-Gann, R., Bertrand, C., Mestre, L., Cuff, J., Perez Hidalgo, N., Ellison, A., Herzog, F., Entling, M., Albrecht, M. & Symondson, W. O. C., 1 Jul 2020, In: PLoS ONE. 15, 7, e0235054.
Research output: Contribution to journal › Article › peer-review
- PublishedKey Questions for Next-Generation Biomonitoring
Makiola, A., Compson, Z. G., Baird, D. J., Barnes, M. A., Boerlijst, S. P., Bouchez, A., Brennan, G., Bush, A., Canard, E., Cordier, T., Creer, S., Curry, R. A., David, P., Dumbrell, A. J., Gravel, D., Hajibabaei, M., Hayden, B., van der Hoorn, B., Jarne, P., Jones, J. I., Karimi, B., Keck, F., Kelly, M., Knot, I. E., Krol, L., Massol, F., Monk, W. A., Murphy, J., Pawlowski, J., Poisot, T., Porter, T. M., Randall, K. C., Ransome, E., Ravigne, V., Raybould, A., Robin, S., Scrama, M., Schatz, B., Tamaddoni-Nezhad, A., Trimbos, K. B., Vacher, C., Vasselon, V., Wood, S., Woodward, G. & Bohan, D. A., 9 Jan 2020, In: Frontiers in Environmental Science.
Research output: Contribution to journal › Article › peer-review
- PublishedLinking microbial communities to soil carbon cycling under anthropogenic change using a trait-based framework
Malik, A., Griffiths, R. & Allison, S., 4 May 2020.
Research output: Contribution to conference › Paper
- PublishedMarking the un-markable: visible implant elastomer in wild juvenile snakes
Major, T., Alkins, D. R., Jeffrey, L. & Wüster, W., 1 Jul 2020, In: Herpetological Journal. 30, 3, p. 173-176 4 p.
Research output: Contribution to journal › Article › peer-review
- PublishedNatural History Notes. Scolecophis atrocinctus (Black-banded Snake). Reproduction / Combat Behaviour
Chernov, E., Hoffmann, E. P. & Wüster, W., 1 Sept 2020, In: Herpetological Review. 51, 3, p. 628-629 2 p.
Research output: Contribution to journal › Article › peer-review
- PublishedNovel genetic sex markers reveal high frequency of sex reversal in wild populations of the agile frog (Rana dalmatina) associated with anthropogenic land use
Nemesházi, E., Gál, Z., Ujhegyi, N., Verebélyi, V., Mikó, Z., Üveges, B., Lefler, K. K., Jeffries, D. L., Hoffmann, O. I. & Bókony, V., 1 Oct 2020, In: Molecular Ecology. 29, 19, p. 3607-3621 15 p.
Research output: Contribution to journal › Article › peer-review
- PublishedNutrient Source and Mycorrhizal Association jointly alters Soil Microbial Communities that shape Plant-Rhizosphere-Soil Carbon-Nutrient Flows
Chowdhury, S., Lange, M., Malik, A. A., Goodall, T., Huang, J., Griffiths, R. I. & Gleixner, G., 19 Jul 2020, In: bioRxiv.
Research output: Contribution to journal › Article › peer-review
- PublishedPhylogenomics and species delimitation for effective conservation of manta and devil rays
Hosegood, J., Humble, E., Ogden, R., De Bruyn, M., Creer, S., Stevens, G. M. W., Abudaya, M., Bassos-Hull, K., Bonfil, R., Fernando, D., Foote, A., Hipperson, H., Jabado, R. W., Kaden, J., Moazzam, M., Peel, L. R., Pollett, S., Ponzo, A., Poortvliet, M., Salah, J., Senn, H., Stewart, J. D., Wintner, S. & Carvalho, G., Dec 2020, In: Molecular Ecology. 29, 24, p. 4783-4796
Research output: Contribution to journal › Article › peer-review
- PublishedRNA-Seq analysis of the guppy immune response against Gyrodactylus bullatarudis infection
Konczal, M., Ellison, A., Phillips, K., Radwan, J., Mohammed, R., Cable, J. & Chadzinska, M., Dec 2020, In: Parasite Immunology. 42, 12, e12782.
Research output: Contribution to journal › Article › peer-review
- PublishedRapid and Predictable Evolution of Admixed Populations Between Two Drosophila Species Pairs
Matute, D. R., Comeault, A., Earley, E., Serrato-Capuchina, A., Peede, D., Monroy-Eklund, A., Huang, W., Jones, C. D., Mackay, T. F. C. & Coyne, J. A., 1 Jan 2020, In: Genetics. 214, 1, p. 211-230 20 p.
Research output: Contribution to journal › Article › peer-review
- PublishedRelative growth of invasive and indigenous tilapiine cichlid fish in Tanzania
Bradbeer, SJ., Ngatunga, BP., Turner, G. F. & Genner, MJ., 2 Jul 2020, In: African Journal of Aquatic Science. 45, 3, p. 378-381 4 p.
Research output: Contribution to journal › Article › peer-review
- PublishedResponse to comments on "Compassionate Conservation deserves a morally serious rather than dismissive response - reply to Callen et al., 2020"
Callen, A., Hayward, M. W., Klop-Toker, K., Allen, B. L., Ballard, G., Beranek, C. T., Broekhuis, F., Bugir, C. K., Clarke, R. H., Clulow, J., Clulow, S., Daltry, J. C., Davies-Mostert, H. T., Di Blanco, Y. E., Dixon, V., Fleming, P. J. S., Howell, L. G., Kerley, G. I. H., Legge, S. M., Lenga, D. J., Major, T., Montgomery, R. A., Moseby, K., Meyer, N., Parker, D. M., Periquet, S., Read, J., Scanlon, R. J., Shuttleworth, C., Tamessar, C. T., Taylor, W. A., Tuft, K., Upton, R. M. O., Valenzuela, M., Witt, R. R. & Wuster, W., 30 Apr 2020, In: Biological Conservation. 244
Research output: Contribution to journal › Letter › peer-review
- PublishedRumen Virus Populations Technological Advances Enhancing Current Understanding
Gilbert, R. A., Townsend, E. M., Crew, K. S., Hitch, T. C. A., Friedersdorff, J. C. A., Creevey, C. J., Pope, P. B., Ouwerkerk, D. & Jameson, E., 26 Mar 2020, In: Frontiers in Microbiology. 11, p. 450
Research output: Contribution to journal › Review article › peer-review
- PublishedShedding of SARS-CoV-2 in feces and urine and its potential role in person-to-person transmission and the environment-based spread of COVID-19
Jones, D. L., Baluja, M. Q., Graham, D. W., Corbishley, A., McDonald, J. E., Malham, S. K., Hillary, L. S., Connor, T. R., Gaze, W. H., Moura, I. B., Wilcox, M. H. & Farkas, K., 20 Dec 2020, In: Science of the Total Environment. 749, 141364.
Research output: Contribution to journal › Review article › peer-review
- PublishedSoil Fungal Community Characteristics and Mycelial Production Across a Disturbance Gradient in Lowland Dipterocarp Rainforest in Borneo
Robinson, S. J. B., Elias, D., Johnson, D., Both, S., Riutta, T., Goodall, T., Majalap, N., McNamara, N. P., Griffiths, R. & Ostle, N., 26 Jun 2020, In: Frontiers in Forests and Global Change. 3
Research output: Contribution to journal › Article › peer-review
- PublishedSoil textural heterogeneity impacts bacterial but not fungal diversity
Seaton, F., George, P., Lebron, I., Jones, D. L., Creer, S. & Robinson, D. A., 1 May 2020, In: Soil Biology and Biochemistry. 144, 107766.
Research output: Contribution to journal › Article › peer-review
- PublishedSpecies Separation within, and Preliminary Phylogeny for, the Leafhopper Genus Anoscopus with Particular Reference to the Putative British Endemic Anoscopus duffieldi (Hemiptera: Cicadellidae)
Redihough, J., Russo, I-R. M., Stewart, A., Malenovský, I., Stockdale, J., Moorhouse-Gann, R., Wilson, M. & Symondson, W. O. C., 13 Nov 2020, In: Insects. 11, 11
Research output: Contribution to journal › Article › peer-review
- PublishedStrong divergent selection at multiple loci in two closely related species of ragworts adapted to high and low elevations on Mount Etna
Wong, E. L. Y., Nevado, B., Osborne, O. G., Papadopulos, A. S. T., Bridle, J. R., Hiscock, S. J. & Filatov, D. A., Jan 2020, In: Molecular Ecology. 29, 2, p. 394-412 19 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSurvival of Brenneria goodwinii and Gibbsiella quercinecans, Associated with Acute Oak Decline, in Rainwater and Forest Soil
Pettifor, B. J., Doonan, J., Denman, S. & McDonald, J., Mar 2020, In: Systematic and Applied Microbiology. 43, 2
Research output: Contribution to journal › Article › peer-review
- PublishedTemperature-mediated shifts in salamander transcriptomic responses to the amphibian-killing fungus
Ellison, A., Zamudio, K. R., Lips, K. R. & Muletz-Wolz, C., 31 Jan 2020, In: Molecular Ecology. 29, 2, p. 325-343 19 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe role of the gut microbiome in sustainable teleost aquaculture
Perry, W., Lindsay, E., Payne, C. J., Brodie, C. & Kazlauskaite, R., 13 May 2020, In: Proceedings of the Royal Society B: Biological Sciences. 287, 1926, 20200184.
Research output: Contribution to journal › Article › peer-review
- PublishedTrait evolution and historical biogeography shape assemblages of annual killifish
Helmstetter, A. J., Papadopulos, A. S. T., Igea, J. & Van Dooren, T. J. M., Sept 2020, In: Journal of Biogeography. 47, 9, p. 1955-1965
Research output: Contribution to journal › Article › peer-review
- PublishedViral indicators for tracking domestic wastewater contamination in the aquatic environment
Farkas, K., Walker, D., Adriaenssens, E., McDonald, J., Hillary, L., Malham, S. & Jones, D. L., 15 Aug 2020, In: Water Research. 181, 115926.
Research output: Contribution to journal › Article › peer-review
- PublishedWastewater and public health: the potential of wastewater surveillance for monitoring COVID-19
Farkas, K., Hillary, L., Malham, S., McDonald, J. & Jones, D. L., Oct 2020, In: Current Opinion in Environmental Science & Health. 17, p. 14-20 7 p.
Research output: Contribution to journal › Article › peer-review
2019
- PublishedA neglected fish stressor: mechanical disturbance during transportation impacts susceptibility to disease in a globally important ornamental fish
Masud, N., Ellison, A. & Cable, J., Apr 2019, In: Diseases of Aquatic Organisms. 134, p. 25-32
Research output: Contribution to journal › Article › peer-review
- PublishedA new family of uncultivated bacteria involved in methanogenesis from the ubiquitous osmolyte glycine betaine in coastal saltmarsh sediments
Jones, H. J., Kröber, E., Stephenson, J., Mausz, M. A., Jameson, E., Millard, A., Purdy, K. J. & Chen, Y., 27 Aug 2019, In: Microbiome. 7, 1, 120.
Research output: Contribution to journal › Article › peer-review
- PublishedA survey of fishes of Hombolo Lake, Dodoma, Tanzania, with evidence for local extinction of a native tilapia as a consequence of stocking
Turner, G. F., Ngatunga, B. P. & Genner, M. J., 6 Mar 2019, p. 452847, 1 p. (bioRxiv).
Research output: Working paper › Preprint
- PublishedAbove-below surface interactions mediate effects of seagrass disturbance on meiobenthic diversity, nematode and polychaete trophic structure
Nascimento, F. J. A., Dahl, M., Deyanova, D., Lyimo, L. D., Bik, H. M., Pereira, T. J., Bjork, M., Creer, S. & Gullstrom, M., 4 Oct 2019, In: Communications Biology. 2, 362.
Research output: Contribution to journal › Article › peer-review
- PublishedAncient habitat shifts and organismal diversification are decoupled in the African viper genus Bitis (Serpentes: Viperidae)
Barlow, A., Wüster, W., Kelly, C. M. R., Branch, W., Phelps, T. & Tolley, K. A., 1 Jun 2019, In: Journal of Biogeography. 46, 6, p. 1234-1248 15 p.
Research output: Contribution to journal › Article › peer-review
- PublishedChemical defense of toad tadpoles under risk by four predator species
Üveges, B., Szederkényi, M., Mahr, K., Móricz, Á. M., Krüzselyi, D., Bókony, V., Hoi, H. & Hettyey, A., 1 Jun 2019, In: Ecology and Evolution. 9, 11, p. 6287-6299 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedConfirmation of Naja oxiana in Himachal Pradesh, India
Santra, V., Owens, J. B., Graham, S., Wüster, W., Kuttalam, S. R., Bharti, O., Selvan, M., Mukherjee, N. & Malhotra, A., 1 Dec 2019, In: Herpetological Bulletin. 150, p. 26-28
Research output: Contribution to journal › Article › peer-review
- PublishedCritical Evaluation of CrAssphage as a Molecular Marker for Human-Derived Wastewater Contamination in the Aquatic Environment
Farkas, K., Adriaenssens, E. M., Walker, D. I., McDonald, J., Malham, S. & Jones, D. L., 1 Jun 2019, In: Food and Environmental Virology. 11, 2, p. 113-119
Research output: Contribution to journal › Article › peer-review
- PublishedCryptic diets of forage fish: jellyfish consumption observed in the Celtic Sea and western English Channel
Lamb, P. D., Hunter, E., Pinnegar, J. K., van der Kooij, J., Creer, S. & Taylor, M. I., 26 Jun 2019, In: Journal of Fish Biology. 94, 6, p. 1026-1032 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedDNA metabarcoding-Need for robust experimental designs to draw sound ecological conclusions
Zinger, L., Bonin, A., Alsos, I. G., Bálint, M., Bik, H., Boyer, F., Chariton, A. A., Creer, S., Coissac, E., Deagle, B. E., De Barba, M., Dickie, I. A., Dumbrell, A. J., Ficetola, G. F., Fierer, N., Fumagalli, L., Gilbert, M. T. P., Jarman, S., Jumpponen, A., Kauserud, H., Orlando, L., Pansu, J., Pawlowski, J., Tedersoo, L., Thomsen, P. F., Willerslev, E. & Taberlet, P., Apr 2019, In: Molecular Ecology. 28, 8, p. 1857-1862 6 p.
Research output: Contribution to journal › Article › peer-review
- PublishedDeconstructing compassionate conservation
Hayward, M. W., Callen, A., Allen, B. L., Ballard, G., Broekhuis, F., Bugir, C., Clarke, R. H., Clulow, J., Clulow, S., Daltry, J. C., Davies-Mostert, H. T., Fleming, P. J. S., Griffin, A. S., Howell, L. G., Kerley, G. I. H., Klop-Toker, K., Legge, S., Major, T., Meyer, N., Montgomery, R. A., Moseby, K., Parker, D. M., Périquet, S., Read, J., Scanlon, R., Seeto, R., Shuttleworth, C., Somers, M. J., Tamessar, C. T., Tuft, K., Upton, R., Valenzuela-Molina, M., Wayne, A., Witt, R. R. & Wuster, W., Aug 2019, In: Conservation Biology. 33, 4, p. 760-768
Research output: Contribution to journal › Article › peer-review
- PublishedDeep segregation in the open ocean: Macaronesia as an evolutionary hotspot for low dispersal marine invertebrates
Vieira, P. E., Desiderato, A., Holdich, D. M., Soares, P., Creer, S., Carvalho, G., Costa, F. O. & Queiroga, H., 1 Apr 2019, In: Molecular Ecology. 28, 7, p. 1784-1800
Research output: Contribution to journal › Article › peer-review
- PublishedDeltaproteobacteria (Pelobacter) and Methanococcoides are responsible for choline-dependent methanogenesis in a coastal saltmarsh sediment
Jameson, E., Stephenson, J., Jones, H., Millard, A., Kaster, A-K., Purdy, K. J., Airs, R., Murrell, J. C. & Chen, Y., 1 Feb 2019, In: The ISME Journal. 13, 2, p. 277-289 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedDemographic reconstruction from ancient DNA supports rapid extinction of the great auk
Thomas, J., Carvalho, G., Haile, J., Rawlence, N. J., Martin, M. D., Ho, S. YW., Sigfússon, A. Þ., Jósefsson, V. A., Frederiksen, M., Linnebjerg, J. F., Samaniego Castruita, J. A., Niemann, J., Sinding, M-H. S., Sandoval-Velasco, M., Soares, A. ER., Lacy, R., Barilaro, C., Best, J., Brandis, D., Cavallo, C., Elorza, M., Garrett, K. L., Groot, M., Johansson, F., Lifjeld, J. T., Nilson, G., Serjeanston, D., Sweet, P., Fuller, E., Hufthammer, A. K., Meldgaard, M., Fjeldsa, J., Shapiro, B., Hofreiter, M., Stewart, J. R., Gilbert, M. T. P. & Knapp, M., 26 Nov 2019, In: Elife. 8, e47509.
Research output: Contribution to journal › Article › peer-review
- PublishedDetection of introduced and resident marine species using environmental DNA metabarcoding of sediment and water
Holman, L. E., de Bruyn, M., Creer, S., Carvalho, G., Robidart, J. & Rius, M., 9 Aug 2019, In: Scientific Reports. 9, 11559.
Research output: Contribution to journal › Article › peer-review
- PublishedDivergent national-scale trends of microbial and animal biodiversity revealed across diverse temperate soil ecosystems
George, P., Lallias, D., Creer, S., Seaton, F., Kenny, J. G., Eccles, R. M., Griffiths, R., Lebron, I., Emmett, B., Robinson, D. & Jones, D. L., 7 Mar 2019, In: Nature Communications. 10, 1, p. 1107 1107.
Research output: Contribution to journal › Article › peer-review
- PublishedEcological speciation in sympatric palms: 3. Genetic map reveals genomic islands underlying species divergence in Howea
Papadopulos, A. S. T., Igea, J., Dunning, L. T., Osborne, O., Quan, X., Pellicer, J., Turnbull, C., Hutton, I., Baker, W. J., Butlin, R. K. & Savolainen, V., Sept 2019, In: Evolution. 73, 9, p. 1986-1995 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedEcological speciation in sympatric palms: 4. Demographic analyses support speciation of Howea in the face of high gene flow
Papadopulos, A. S. T., Igea, J., Smith, T. P., Hutton, I., Baker, W. J., Butlin, R. K. & Savolainen, V., Sept 2019, In: Evolution. 73, 9, p. 1996-2002 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental DNA size sorting and degradation experiment indicates the state of Daphnia magna mitochondrial and nuclear eDNA is subcellular
Moushomi, R., Wilgar, G., Carvalho, G., Creer, S. & Seymour, M., 29 Aug 2019, In: Scientific Reports. 9, 12500 (2019.
Research output: Contribution to journal › Article › peer-review
- PublishedEvolutionary drivers of kype size in Atlantic salmon (Salmo salar): domestication, age and genetics
Perry, W. B., Solberg, M. F., Besnier, F., Dyrhovden, L., Matre, I. H., Fjelldal, P. G., Ayllon, F., Creer, S., Llewelyn, M., Taylor, M. I., Carvalho, G. & Glover, K. A., 17 Apr 2019, In: Royal Society Open Science. 6, 4, 190021.
Research output: Contribution to journal › Article › peer-review
- PublishedExtraction of Microbial and Host DNA, RNA, and Proteins from Oak Bark Tissue
Broberg, M. & McDonald, J., 5 Feb 2019, In: Methods and Protocols. 2, 1, 15.
Research output: Contribution to journal › Article › peer-review
- PublishedGenomic analysis of bacteria in the Acute Oak Decline pathobiome
Doonan, J., Denman, S., Pachebat, J. A. & McDonald, J., 8 Jan 2019, In: Microbial Genomics. 5, 1, 15 p.
Research output: Contribution to journal › Article › peer-review
- PublishedGrassland biodiversity restoration increases resistance of carbon fluxes to drought
Cole, A. J., Griffiths, R. I., Ward, S. E., Whitaker, J., Ostle, N. J. & Bardgett, R. D., 19 Apr 2019, In: Journal of Applied Ecology. 56, 7, p. 1806-1816 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedHow quantitative is metabarcoding: a meta-analytical approach
Lamb, P. D., Hunter, E., Pinnegar, J. K., Creer, S., Taylor, M. I. & Davies, R. G., Jan 2019, In: Molecular Ecology. 28, 2, p. 420-430 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedInclusion of jellyfish in 30+ years of Ecopath with Ecosim models
Lamb, P. D., Hunter, E., Pinnegar, J. K., Doyle, T. K., Creer, S. & Taylor, M. I., 1 Dec 2019, In: ICES Journal of Marine Science. 76, 7, p. 1941–1950
Research output: Contribution to journal › Article › peer-review
- PublishedIntroduction: Special issue on species interactions, ecological networks and community dynamics – Untangling the entangled bank using molecular techniques
Roslin, T., Traugott, M., Jonsson, M., Stone, G. N., Creer, S. & Symondson, W. O. C., 1 Jan 2019, In: Molecular Ecology. 28, 2, p. 157-164
Research output: Contribution to journal › Article › peer-review
- PublishedLimited hybridization between introduced and Critically Endangered indigenous tilapia fishes in northern Tanzania
Bradbeer, S. J., Harrington, J., Watson, H., Warraich, A., Shechonge, A., Smith, A., Tamatamah, R., Ngatunga, B. P., Turner, G. F. & Genner, M. J., Apr 2019, In: Hydrobiologia. 832, 1, p. 257-268 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedLong-term cleaning patterns of the sharknose goby (Elacatinus evelynae)
Dunkley, K., Ellison, A., Mohammed, R. S., van Oosterhout, C., Whittey, K. E., Perkins, S. E. & Cable, J., 1 Apr 2019, In: Coral Reefs. 38, 2, p. 321-330
Research output: Contribution to journal › Article › peer-review
- PublishedMolecular phylogeny of Oreochromis (Cichlidae: Oreochromini) reveals mito-nuclear discordance and multiple colonisation of adverse aquatic environments
Day, J. J., Ford, A. G. P., Bullen, T. R., Pang, L., Genner, M. J., Bills, R., Flouri, T., Ngatunga, B. P., Ruber, L., Schliewen, U. K., Seehausen, O., Shechonge, A., Stiassny, M. L. J. & Turner, G., Jul 2019, In: Molecular Phylogenetics and Evolution. 136, p. 215-226
Research output: Contribution to journal › Article › peer-review
- PublishedMultilocus phylogeography of the brown-spotted pitviper Protobothrops mucrosquamatus (Reptilia: Serpentes: Viperidae) sheds a new light on the diversification pattern in Asia
Guo, P., Liu, Q., Zhu, F., Zhong, G. H., Che, J., Wang, P., Xie, Y. L., Murphy, R. W. & Malhotra, A., Apr 2019, In: Molecular Phylogenetics and Evolution. 133, p. 82-91
Research output: Contribution to journal › Article › peer-review
- PublishedOlfactory Proteins in Timema Stick Insects
Parker, D. J., Djordjevic, J. & Schwander, T., 5 Apr 2019, In: Frontiers in Ecology and Evolution. 7
Research output: Contribution to journal › Article › peer-review
- PublishedPersistence of dissolved organic matter explained by molecular changes during its passage through soil
Roth, V-N., Lange, M., Simon, C., Hertkorn, N., Bucher, S., Goodall, T., Griffiths, R. I., Mellado-Vázquez, P. G., Mommer, L., Oram, N. J., Weigelt, A., Dittmar, T. & Gleixner, G., 5 Aug 2019, In: Nature Geoscience. 12, 9, p. 755-761 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedPlant and soil communities are associated with the response of soil water repellency to environmental stress
Seaton, F., Jones, D. L., Creer, S., George, P., Smart, S. M., Lebron, I., Barrett, G., Emmett, B. & Robinson, D., 15 Oct 2019, In: Science of the Total Environment. 687, p. 929-938
Research output: Contribution to journal › Article › peer-review
- PublishedPopulation genetic evidence for a unique resource of Nile tilapia in Lake Tanganyika, East Africa
Shechonge, A., Ngatunga, B. P., Tamatamah, R., Bradbeer, S. J., Sweke, E., Smith, A., Turner, G. F. & Genner, M. J., Aug 2019, In: Environmental Biology of Fishes. 102, 8, p. 1107-1117 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedPredator-induced changes in the chemical defence of a vertebrate
Hettyey, A., Üveges, B., Móricz, Á. M., Drahos, L., Capon, R. J., Van Buskirk, J., Tóth, Z. & Bókony, V., 1 Dec 2019, In: Journal of Animal Ecology. 88, 12, p. 1925-1935 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedPrevention is better than cure : snakebite education in India
Trogridou, A., Graham, S., Santra, V., Owens, J. B., Bharti, O. & Malhotra, A., 2019, In: Episthmes Agogis . p. 75-96
Research output: Contribution to journal › Article › peer-review
- PublishedPrimer and database choice affect fungal functional but not biological diversity findings in a national soil survey
George, P., Creer, S., Griffiths, R. I., Emmett, B. A., Robinson, D. A. & Jones, D. L., 1 Nov 2019, In: Frontiers in Environmental Science. 7, 173.
Research output: Contribution to journal › Article › peer-review
- PublishedRepeated Evolution of Asexuality Involves Convergent Gene Expression Changes
Parker, D. J., Bast, J., Jalvingh, K., Dumas, Z., Robinson-Rechavi, M. & Schwander, T., 1 Feb 2019, In: Molecular Biology and Evolution. 36, 2, p. 350-364 15 p.
Research output: Contribution to journal › Article › peer-review
- PublishedRiding the wave of genomics to investigate aquatic coliphage diversity and activity
Michniewski, S., Redgwell, T., Grigonyte, A., Rihtman, B., Aguilo-Ferretjans, M., Christie-Oleza, J., Jameson, E., Scanlan, D. J. & Millard, A. D., 1 Jun 2019, In: Environmental Microbiology. 21, 6, p. 2112-2128 17 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSalinity drives meiofaunal community structure dynamics across the Baltic ecosystem
Broman, E., Raymond, C., Sommer, C., Gunnarsson, J. S., Creer, S. & Nascimento, F. J. A., Aug 2019, In: Molecular Ecology. 28, 16, p. 3813-3829 17 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSex-biased gene expression is repeatedly masculinized in asexual females
Parker, D. J., Bast, J., Jalvingh, K., Dumas, Z., Robinson-Rechavi, M. & Schwander, T., 11 Oct 2019, In: Nature Communications. 10, 1, p. 4638
Research output: Contribution to journal › Article › peer-review
- PublishedSoil microbial communities with greater investment in resource acquisition have lower growth yield
Malik, A. A., Puissant, J., Goodall, T., Allison, S. D. & Griffiths, R. I., May 2019, In: Soil Biology and Biochemistry. 132, p. 36-39 4 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSoil parameters, land use, and geographical distance drive soil bacterial communities along a European transect
Plassart, P., Prévost-Bouré, N. C., Uroz, S., Dequiedt, S., Stone, D., Creamer, R., Griffiths, R. I., Bailey, M. J., Ranjard, L. & Lemanceau, P., 24 Jan 2019, In: Scientific Reports. 9, 1, 605.
Research output: Contribution to journal › Article › peer-review
- PublishedTemperate airborne grass pollen defined by spatio-temporal shifts in community composition
Brennan, G. L., Potter, C., De Vere, N., Griffith, G. W., Skjøth, C. A., Osborne, N. J., Wheeler, B. W., McInnes, R. N., Clewlow, Y., Barber, A., Hanlon, H. M., Hegarty, M., Jones, L., Kurganskiy, A., Rowney, F. M., Armitage, C., Adams-Groom, B., Ford, C. R., Petch, G. M., The PollerGEN Consortium & Creer, S., May 2019, In: Nature Ecology and Evolution. 3, 5, p. 750-754
Research output: Contribution to journal › Article › peer-review
- PublishedThe diet of red-throated divers (Gavia stellata) overwintering in the German Bight (North Sea) analysed using molecular diagnostics
Kleinschmidt, B., Burger, C., Dorsch, M., Nehls, G., Heinänen, S., Morkūnas, J., Žydelis, R., Moorhouse-Gann, R., Hipperson, H., Symondson, W. & Quillfeldt, P., 16 May 2019, In: Marine Biology. 166, 77.
Research output: Contribution to journal › Article › peer-review
- PublishedThe pH optimum of soil exoenzymes adapt to long term changes in soil pH
Puissant, J., Jones, B., Goodall, T., Mang, D., Blaud, A., Gweon, H. S., Malik, A., Jones, D. L., Clark, I. M., Hirsch, P. R. & Griffiths, R., Nov 2019, In: Soil Biology and Biochemistry. 138, 107601.
Research output: Contribution to journal › Article › peer-review
- PublishedToads phenotypically adjust their chemical defences to anthropogenic habitat change
Bókony, V., Üveges, B., Verebélyi, V., Ujhegyi, N. & Móricz, Á. M., 28 Feb 2019, In: Scientific Reports. 9, 1
Research output: Contribution to journal › Article › peer-review
- PublishedValidating the Demethylating Effects of 5-aza-2'-deoxycytidine in Insects Requires a Whole-Genome Approach
Cook, N., Parker, D. J., Tauber, E., Pannebakker, B. A. & Shuker, D. M., Sept 2019, In: American Naturalist. 194, 3, p. 432-438 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedWhen one phenotype is not enough: divergent evolutionary trajectories govern venom variation in a widespread rattlesnake species
Zancolli, G., Calvete, J. J., Cardwell, M. D., Greene, H. W., Hayes, W. K., Hegarty, M. J., Herrmann, H-W., Holycross, A. T., Lannutti, D. I., Mulley, J. F., Sanz, L., Travis, Z. D., Whorley, J. R., Wuster, C. E. & Wuster, W., 13 Mar 2019, In: Proceedings of the Royal Society B: Biological Sciences. 286, 1898, p. 20182735
Research output: Contribution to journal › Article › peer-review
- PublishedWidespread colonisation of Tanzanian catchments by introduced Oreochromis tilapia fishes: the legacy from decades of deliberate introduction
Shechonge, A., Ngatunga, B. P., Bradbeer, S. J., Day, J. J., Freer, J. J., Ford, A. GP., Kihedu, J., Richmond, T., Mzighani, S., Smith, A. M., Sweke, E. A., Tamatamah, R., Tyers, A. M., Turner, G. F. & Genner, M. J., Apr 2019, In: Hydrobiologia. 832, 1, p. 235-253 19 p.
Research output: Contribution to journal › Article › peer-review
- PublishedZones of influence for soil organic matter dynamics: A conceptual framework for data and models
Cagnarini, C., Blyth, E., Emmett, B. A., Evans, C. D., Griffiths, R. I., Keith, A., Jones, L., Lebron, I., McNamara, N. P., Puissant, J., Reinsch, S., Robinson, D. A., Rowe, E. C., Thomas, A. R. C., Smart, S. M., Whitaker, J. & Cosby, B. J., 6 Aug 2019, In: Global Change Biology. 25, 12, p. 3996-4007 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedpH and exchangeable aluminum are major regulators of microbial energy flow and carbon use efficiency in soil microbial communities
Jones, D. L., Cooledge, E., Hoyle, F., Griffiths, R. & Murphy, D., Nov 2019, In: Soil Biology and Biochemistry. 138, 107584.
Research output: Contribution to journal › Article › peer-review
2018
- PublishedA Maladaptive Combination of Traits Contributes to the Maintenance of a Drosophila Hybrid Zone
Cooper, B. S., Sedghifar, A., Nash, W. T., Comeault, A. A. & Matute, D. R., 30 Aug 2018, In: Current Biology. 28, 18, p. 2940-2947
Research output: Contribution to journal › Article › peer-review
- PublishedAcidity promotes degradation of multi-species environmental DNA in lotic mesocosms
Seymour, M., Durance, I., Cosby, B. J., Ransom-Jones, E., Deiner, K., Ormerod, S. J., Colbourne, J. K., Wilgar, G., Carvalho, G., De Bruyn, M., Edwards, F., Emmett, B. A., Bik, H. M. & Creer, S., 22 Jan 2018, In: Communications Biology. 1, 4.
Research output: Contribution to journal › Article › peer-review
- PublishedCan we solve the snakebite crisis in India?
Malhotra, A. & Vasudevan, K., Apr 2018, 6 p.
Research output: Other contribution
- PublishedCompetition induces increased toxin production in toad larvae without allelopathic effects on heterospecific tadpoles
Bokony, V., Uveges, B., Moricz, A. M. & Hettyey, A., 1 Mar 2018, In: Functional Ecology. 32, 3, p. 667-675
Research output: Contribution to journal › Article › peer-review
- PublishedConsequences of Asexuality in Natural Populations: Insights from Stick Insects
Bast, J., Parker, D. J., Dumas, Z., Jalvingh, K. M., Tran Van, P., Jaron, K. S., Figuet, E., Brandt, A., Galtier, N. & Schwander, T., 1 Jul 2018, In: Molecular Biology and Evolution. 35, 7, p. 1668-1677 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedDetecting macroecological patterns in bacterial communities across independent studies of global soils
Ramirez, K. S., Knight, C. G., Hollander, M., Brearley, F. Q., Constantinides, B., Cotton, T. E. A., Creer, S., Crowther, T. W., Davison, J., Delgado-Baquerizo, M., Dorrepaal, E., Elliott, D. R., Fox, G., Griffiths, R., Hale, C., Hartman, K., Houlden, A., Jones, D., Krab, E. J., Maestre, F. T., McGuire, K. L., Monteux, S., Orr, C. H., van der Putten, W. H., Roberts, I. S., Robinson, D., Rocca, J., Rowntree, J., Schlaeppi, K., Shepherd, M., Singh, B. K., Straathof, A., Talbot, J. M., Thion, C., van der Heijden, M. & de Vries, F. T., 2018, In: Nature Microbiology. 3, p. 189-196 8 p.
Research output: Contribution to journal › Article › peer-review
- PublishedDiversity and community composition of pico- and nanoplanktonic protists in the Vistula River estuary (Gulf of Gdańsk, Baltic Sea)
Piwosz, K., Calkiewicz, J., Golebiewski, M. & Creer, S., 31 Jul 2018, In: Estuarine, Coastal and Shelf Science. 207, p. 242-249
Research output: Contribution to journal › Article › peer-review
- PublishedEndocrine disruptors in breeding ponds and reproductive health of toads in agricultural, urban and natural landscapes
Bókony, V., Üveges, B., Ujhegyi, N., Verebélyi, V., Nemesházi, E., Csíkvári, O. & Hettyey, A., 1 Sept 2018, In: Science of the Total Environment. 634, p. 1335-1345 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedEvolutionary and developmental dynamics of sex-biased gene expression in common frogs with proto-Y chromosomes
Ma, W-J., Veltsos, P., Sermier, R., Parker, D. J. & Perrin, N., 5 Oct 2018, In: Genome biology. 19, 1, p. 156
Research output: Contribution to journal › Article › peer-review
- PublishedFundamental and realized feeding niche breadths of sexual and asexual stick insects
Larose, C., Parker, D. J. & Schwander, T., 5 Dec 2018, In: Proceedings of the Royal Society B: Biological Sciences. 285, 1892
Research output: Contribution to journal › Article › peer-review
- PublishedGenetic divergence and the number of hybridizing species affect the path to homoploid hybrid speciation
Comeault, A. A. & Matute, D. R., 25 Sept 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 39, p. 9761-9766
Research output: Contribution to journal › Article › peer-review
- PublishedIntegrated multi-omic analysis of host-microbiota interactions in acute oak decline
Broberg, M., Doonan, J., Mundt, F. & McDonald, J., 30 Jan 2018, In: Microbiome. 6, 21.
Research output: Contribution to journal › Article › peer-review
- PublishedIntegration of nuclear and mitochondrial gene sequences and morphology reveals unexpected diversity in the forest cobra (Naja melanoleuca) species complex in Central and West Africa (Serpentes: Elapidae).
Wuster, W., Chirio, L., Trape, J. F., Ineich, I., Jackson, K., Greenbaum, E., Barron, C., Kusamba, C., Nagy, Z. T., Storey, R., Hall, C., Wuster, C., Barlow, A. & Broadley, D. G., 1 Aug 2018, In: Zootaxa. 4455, 1, p. 68-98 21 p.
Research output: Contribution to journal › Article › peer-review
- PublishedInter and Intraspecific Genomic Divergence in Drosophila montana Shows Evidence for Cold Adaptation
Parker, D. J., Wiberg, R. A. W., Trivedi, U., Tyukmaeva, V. I., Gharbi, K., Butlin, R. K., Hoikkala, A., Kankare, M. & Ritchie, M. G., 1 Aug 2018, In: Genome Biology and Evolution. 10, 8, p. 2086-2101 16 p.
Research output: Contribution to journal › Article › peer-review
- PublishedLand use driven change in soil pH affects microbial carbon cycling processes
Malik, A. A., Puissant, J., Buckeridge, K. M., Goodall, T., Jehmlich, N., Chowdhury, S., Gweon, H. S., Peyton, J. M., Mason, K. E., van Agtmaal, M., Blaud, A., Clark, I. M., Whitaker, J., Pywell, R. F., Ostle, N., Gleixner, G. & Griffiths, R. I., 4 Sept 2018, In: Nature Communications. 9, 1, 3591.
Research output: Contribution to journal › Article › peer-review
- PublishedLosing cichlid fish biodiversity: genetic and morphological homogenization of tilapia following colonization by introduced species
Shechonge, A., Ngatunga, B. P., Tamatamah, R., Bradbeer, S. J., Harrington, J., Ford, A. G. P., Turner, G. F. & Genner, M. J., Oct 2018, In: Conservation Genetics. 19, 5, p. 1199-1209
Research output: Contribution to journal › Article › peer-review
- PublishedMethodological considerations for the identification of choline and carnitine-degrading bacteria in the gut
Jameson, E., Quareshy, M. & Chen, Y., 1 Oct 2018, In: Methods (San Diego, Calif.). 149, p. 42-48 7 p.
Research output: Contribution to journal › Review article › peer-review
- PublishedMicrobiome and infectivity studies reveal complex polyspecies tree disease in Acute Oak Decline
Denman, S., Doonan, J., Ransom-Jones, E., Broberg, M., Plummer, S., Kirk, S. A., Scarlett, K., Griffiths, A., Kaczmarek, M., Foster, J., Peace, A., Golyshin, P., Hassard, F., Brown, N., Kenny, J. G. & McDonald, J., 2018, In: The ISME Journal. 12, p. 386-399
Research output: Contribution to journal › Article › peer-review
- PublishedMultilocus phylogeny, species age and biogeography of the Lesser Antillean anoles
Thorpe, R., Barlow, A., Surget-Groba, Y. & Malhotra, A., Oct 2018, In: Molecular Phylogenetics and Evolution. 127, p. 682-695
Research output: Contribution to journal › Article › peer-review
- PublishedNew universal ITS2 primers for high-resolution herbivory analyses using DNA metabarcoding in both tropical and temperate zones
Moorhouse-Gann, R., Dunn, J., de Vere, N., Goder, M., Cole, N. C., Hipperson, H. & Symondson, W., 4 Jun 2018, In: Scientific Reports. 8, 8542.
Research output: Contribution to journal › Article › peer-review
- PublishedPerformance of amplicon and shotgun sequencing for accurate biomass estimation in invertebrate community samples
Bista, I., Carvalho, G., Tang, M., Walsh, K., Zhou, X., Hajibabaei, M., Shokralla, S., Seymour, M., Bradley, D., Liu, S., Christmas, M. & Creer, S., Sept 2018, In: Molecular Ecology Resources. 18, 5, p. 1020-1034
Research output: Contribution to journal › Article › peer-review
- PublishedPhotosensitive Alternative Splicing of the Circadian Clock Gene timeless Is Population Specific in a Cold-Adapted Fly, Drosophila montana
Tapanainen, R., Parker, D. J. & Kankare, M., 1 Apr 2018, In: G3: Genes, Genomes, Genetics. 8, 4, p. 1291-1297 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedRational truncation of aptamer for cross-species application to detect krait envenomation
Dhiman, A., Anand, A., Malhotra, A., Khan, E., Santra, V., Kumar, A. & Sharma, T. K., 12 Dec 2018, In: Scientific Reports. 8, 17795.
Research output: Contribution to journal › Article › peer-review
- PublishedReproductive biology and size structure of Lethrinops gossei (Teleostei: Cichlidae) in the demersal trawl fishery of the southeast arm of Lake Malai, Malai
Bulirani, A. EM., Kaunda, E. KWH., Likongwe, J., Turner, G. F. & Weyl, O. F., 2018, In: Aquatic Ecosystem Health and Management. 21, 2, p. 152-158 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSample size effects on the assessment of eukaryotic diversity and community structure in aquatic sediments using high-throughput sequencing
Nascimento, F. J. A., Lallias, D., Bik, H. M. & Creer, S., 6 Aug 2018, In: Scientific Reports. 8
Research output: Contribution to journal › Article › peer-review
- PublishedSeasonal and diurnal surveillance of treated and untreated wastewater for human enteric viruses
Farkas, K., Marshall, M., Cooper, D., McDonald, J. E., Malham, S. K., Peters, D. E., Maloney, J. D. & Jones, D. L., Nov 2018, In: Environmental Science and Pollution Research. 25, 33, p. 33391-33401
Research output: Contribution to journal › Article › peer-review
- PublishedSeasonal and spatial dynamics of enteric viruses in wastewater and in riverine and estuarine receiving waters
Malham, S., Farkas, K., McDonald, J., Jones, D. L., Cooper, D. & de Rougemont, A., 1 Sept 2018, In: Science of the Total Environment. 634, p. 1174 1183 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSeasonality alters drivers of soil enzyme activity in subalpine grassland soil undergoing climate change
Puissant, J., Jassey, V. E. J., Mills, R. T. E., Robroek, B. J. M., Gavazov, K., De Danieli, S., Spiegelberger, T., Griffiths, R., Buttler, A., Brun, J-J. & Cécillon, L., Sept 2018, In: Soil Biology and Biochemistry. 124, p. 266-274 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSoil bacterial networks are less stable under drought than fungal networks
de Vries, F. T., Griffiths, R. I., Bailey, M., Craig, H., Girlanda, M., Gweon, H. S., Hallin, S., Kaisermann, A., Keith, A. M., Kretzschmar, M., Lemanceau, P., Lumini, E., Mason, K. E., Oliver, A., Ostle, N., Prosser, J. I., Thion, C., Thomson, B. & Bardgett, R. D., 2 Aug 2018, In: Nature Communications. 9, 1
Research output: Contribution to journal › Article › peer-review
- PublishedStepping stones to isolation: Impacts of a changing climate on the connectivity of fragmented fish populations
Young, E. F., Tysklind, N., Meredith, M. P., de Bruyn, M., Belchier, M., Murphy, E. J. & Carvalho, G. R., Jul 2018, In: Evolutionary Applications. 11, 6, p. 978-994
Research output: Contribution to journal › Article › peer-review
- PublishedThe decline of the Turtle Dove: Dietary associations with body condition and competition with other columbids analysed using high-throughput sequencing
Dunn, J., Stockdale, J., Moorhouse-Gann, R., McCubbin, A., Hipperson, H., Morris, A., Grice, P. & Symondson, W., 1 Aug 2018, In: Molecular Ecology. 27, 16, p. 3386-3407
Research output: Contribution to journal › Article › peer-review
- PublishedThe genomic and ecological context of hybridization affects the probability that symmetrical incompatibilities drive hybrid speciation
Comeault, A., Mar 2018, In: Ecology and Evolution. 8, 5, p. 2926-2937 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe medical threat of mamba envenoming in sub-Saharan Africa revealed by genus-wide analysis of venom composition, toxicity and antivenomics profiling of available antivenoms
Ainsworth, S., Petras, D., Engmark, M., Süssmuth, R., Rowley, P., Wuster, W., Dorrestein, P. C., Arias, A. S., Gutiérrez, J. M., Harrison, R. A., Casewell, N. R. & Calvete, J. J., 10 Feb 2018, In: Journal of Proteomics. 172, p. 173-189
Research output: Contribution to journal › Article › peer-review
- PublishedTranscriptomic response to parasite infection in Nile tilapia (Oreochromis niloticus) depends on rearing density
Ellison, A. R., Uren Webster, T. M., Rey, O., Garcia de Leaniz, C., Consuegra, S., Orozco-terWengel, P. & Cable, J., 1 Oct 2018, In: BMC Genomics. 19, 723.
Research output: Contribution to journal › Article › peer-review
- PublishedTwo-Step Concentration of Complex Water Samples for the Detection of Viruses
Farkas, K., McDonald, J., Malham, S. & Jones, D. L., 10 Sept 2018, In: Methods and Protocols. 1, 3, 35.
Research output: Contribution to journal › Article › peer-review
- PublishedVenom complexity in a pitviper produced by facultative parthenogenesis
Calvete, J. J., Casewell, N. R., Hernandez-Guzman, U., Quesada-Bernat, S., Sanz, L., Rokyta, D. R., Storey, D., Albulescu, L. O., Wuster, W., Smith, C. F., Schuett, G. W. & Booth, W., 1 Aug 2018, In: Scientific Reports. 8, 12 p., 11539 (2018).
Research output: Contribution to journal › Article › peer-review
- PublishedWhole genome duplication and transposable element proliferation drive genome expansion in Corydoradinae catfishes
Marburger, S., Alexandrou, M., Taggart, J. B., Creer, S., Carvalho, G., Oliveira, C. & Taylor, M. I., 14 Feb 2018, In: Proceedings of the Royal Society B: Biological Sciences. 285, 1872, 20172732.
Research output: Contribution to journal › Article › peer-review
- PublishedWhole genome sequences of Malawi cichlids reveal multiple radiations interconnected by gene flow
Malinsky, M., Svardal, H., Tyers, A., Miska, E. A., Genner, M. J., Turner, G. & Durbin, R., Dec 2018, In: Nature Ecology and Evolution. 2, p. 1940-1955
Research output: Contribution to journal › Article › peer-review
- PublishedWidespread vulnerability of Malagasy predators to the toxins of an introduced toad
Marshall, B. M., Casewell, N. R., Vences, M., Glaw, F., Andreone, F., Rakotoarison, A., Zancolli, G., Woog, F. & Wuster, W., 4 Jun 2018, In: Current Biology. 28, 11, p. R654-R655 2 p.
Research output: Contribution to journal › Article › peer-review
2017
- PublishedA communal catalogue reveals Earth's multiscale microbial diversity
Thompson, L. R., Sanders, J. G., McDonald, D., Amir, A., Ladau, J., Locey, K. J., Prill, R. J., Tripathi, A., Gibbons, S. M., Ackermann, G., Navas-Molina, J. A., Janssen, S., Kopylova, E., Vazquez-Baeza, Y., Gonzalez, A., Morton, J. T., Mirarab, S., Xu, Z. Z., Jiang, L., Haroon, M. F., Kanbar, J., Zhu, Q., Song, S. J., Kosciolek, T., Bokulich, N. A., Lefler, J., Brislawn, C. J., Humphrey, G., Owens, S. M., Hampton-Marcell, J., Berg-Lyons, D., McKenzie, V., Fierer, N., Fuhrman, J. A., Clauset, A., Stevens, R. L., Shade, A., Pollard, K. S., Goodwin, K. D., Jansson, J. K., Gilbert, J. A., Knight, R., Agosto Rivera, J. L., Al-Moosawi, L., Alverdy, J., Amato, K. R., Andras, J., Angenent, L. T., Antonopoulos, D. A., Apprill, A., Armitage, D., Ballantine, K., Bárta, J., Baum, J. K., Berry, A., Bhatnagar, A., Bhatnagar, M., Biddle, J. F., Bittner, L., Boldgiv, B., Bottos, E., Boyer, D. M., Braun, J., Brazelton, W., Brearley, F. Q., Campbell, A. H., Caporaso, J. G., Cardona, C., Carroll, J., Cary, S. C., Casper, B. B., Charles, T. C., Chu, H., Claar, D. C., Clark, R. G., Clayton, J. B., Clemente, J. C., Cochran, A., Coleman, M. L., Collins, G., Colwel, R. R., Contreras, M., Crary, B. B., Creer, S., Cristol, D. A., Crump, B. C., Cui, D., Daly, S. E., Davalos, L., Dawson, R. D., Defazio, J., Delsuc, F., Dionisi, H. M., Dominguez-Bello, M. G., Dowell, R., Dubinsky, E. A., Dunn, P. O., Ercolini, D., Espinoza, R. E., Ezenwa, V., Fenner, N., Findlay, H. S., Fleming, I. D., Fogliano, V., Forsman, A., Freeman, C., Friedman, E. S., Galindo, G., Garcia, L., Garcia-Amado, M. A., Garshelis, D., Gasser, R. B., Gerdts, G., Gibson, M. K., Gifford, I., Gill, R. T., Giray, T., Gittel, A., Golyshin, P., Gong, D., Grossart, H-P., Guyton, K., Haig, S-J., Hale, V., Hall, R. S., Hallam, S. J., Handley, K. M., Hasan, N. A., Haydon, S. R., Hickman, J. E., Hidalgo, G., Hofmockel, K. S., Hooker, J., Hulth, S., Hultman, J., Hyde, E., Ibáñez-Álamo, J. D., Jastrow, J. D., Jex, A. R., Johnson, L. S., Johnston, E. R., Joseph, S., Jurburg, S. D., Jurelevicius, D., Karlsson, A., Karlsson, R., Kauppinen, S., Kellogg, C. T. E., Kennedy, S. J., Kerkhof, L. J., King, G. M., Kling, G. W., Koehler, A. V., Krezalek, M., Kueneman, J., Lamendella, R., Landon, E. M., Lane-deGraaf, K., LaRoche, J., Larsen, P., Laverock, B., Lax, S., Lentino, M., Levin, I. I., Liancourt, P., Liang, W., Linz, A. M., Lipson, D. A., Liu, Y., Lladser, M. E., Lozada, M., Spirito, C. M., MacCormack, W. P., MacRae-Crerar, A., Magris, M., Martín-Platero, A. M., Martín-Vivaldi, M., Martínez, L. M., Martínez-Bueno, M., Marzinelli, E. M., Mason, O. U., Mayer, G. D., McDevitt-Irwin, J. M., McDonald, J., McGuire, K. L., McMahon, K. D., McMinds, R., Medina, M., Mendelson, J. R., Metcalf, J. L., Meyer, F., Michelangeli, F., Miller, K., Mills, D. A., Minich, J., Mocali, S., Moitinho-Silva, L., Moore, A., Morgan-Kiss, R. M., Munroe, P., Myrold, D., Neufeld, J. D., Ni, Y., Nicol, G. W., Nielsen, S., Nissimov, J. I., Niu, K., Nolan, M. J., Noyce, K., O’Brien, S. L., Okamoto, N., Orlando, L., Ortiz Castellano, Y., Osuolale, O., Oswald, W., Parnell, J., Peralta-Sánchez, J. M., Petraitis, P., Pfister, C., Pilon-Smits, E., Piombino, P., Pointing, S. B., Pollock, F. J., Potter, C., Prithiviraj, B., Quince, C., Rani, A., Ranjan, R., Rao, S., Rees, A. P., Richardson, M., Riebesell, U., Robinson, C., Rockne, K. J., Rodriguezl, S. M., Rohwer, F., Roundstone, W., Safran, R. J., Sangwan, N., Sanz, V., Schrenk, M., Schrenzel, M. D., Scott, N. M., Seger, R. L., Seguin-Orlando, A., Seldin, L., Seyler, L. M., Shakhsheer, B., Sheets, G. M., Shen, C., Shi, Y., Shin, H., Shogan, B. D., Shutler, D., Siegel, J., Simmons, S., Sjöling, S., Smith, D. P., Soler, J. J., Sperling, M., Steinberg, P. D., Stephens, B., Stevens, M. A., Taghavi, S., Tai, V., Tait, K., Tan, C. L., Tas, N., Taylor, D. L., Thomas, T., Timling, I., Turner, B. L., Urich, T., Ursell, L. K., van der Lelie, D., Van Treuren, W., van Zwieten, L., Vargas-Robles, D., Vega Thurber, R., Vitaglione, P., Walker, D. A., Walters, W. A., Wang, S., Wang, T., Weave, T., Webster, N. S., Wehrle, B., Weisenhorn, P., Weiss, S., Werner, J. J., West, K., Whitehead, A., Whitehead, S. R., Whittingham, L. A., Willerslev, E., Williams, A. E., Wood, S. A., Woodhams, D. C., Yang, Y., Zaneveld, J., Zarraonaindia, I., Zhang, Q. & Zhao, H., 23 Nov 2017, In: Nature. 551, 7681, p. 457-+
Research output: Contribution to journal › Article › peer-review
- PublishedA nonrandom subset of olfactory genes is associated with host preference in the fruit fly Drosophila orena
Comeault, A. A., Serrato-Capuchina, A., Turissini, D. A., McLaughlin, P. J., David, J. R. & Matute, D. R., Jun 2017, In: Evolution Letters. 1, 2, p. 73-85 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedAge- and environment-dependent changes in chemical defences of larval and post-metamorphic toads
Üveges, B., Fera, G., Móricz, Á. M., Krüzselyi, D., Bókony, V. & Hettyey, A., 13 Jun 2017, In: BMC Evolutionary Biology. 17, 1, p. 137
Research output: Contribution to journal › Article › peer-review
- PublishedAnnual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity
Bista, I., Carvalho, G., Walsh, K., Seymour, M., Hajibabaei, M., Lallias, D., Christmas, M. & Creer, S., Jan 2017, In: Nature Communications. 8, 14087.
Research output: Contribution to journal › Article › peer-review
- PublishedBacterial Physiological Adaptations to Contrasting Edaphic Conditions Identified Using Landscape Scale Metagenomics
A., M. A., C., T. B., S., W. A., Mark, B. & I., G. R., 5 Jul 2017, In: mBio. 8, 4
Research output: Contribution to journal › Article › peer-review
- PublishedChytrid fungus infection in zebrafish demonstrates that the pathogen can parasitize non-amphibian vertebrate hosts
Liew, N., Moya, M. J. M., Wierzbicki, C. J., Hollinshead, M., Dillon, M. J., Thornton, C. R., Ellison, A., Cable, J., Fisher, M. C. & Mostowy, S., 20 Apr 2017, In: Nature Communications. 8, 15048.
Research output: Contribution to journal › Article › peer-review
- PublishedCritical Review on the Public Health Impact of Norovirus Contamination in Shellfish and the Environment: A UK Perspective
Hassard, F., Sharp, J., Taft, H., Le Vay, L., Harris, J., McDonald, J., Tuson, K., Wilson, J., Jones, D. & Malham, S., Jun 2017, In: Food and Environmental Virology. 9, 2, p. 123-141
Research output: Contribution to journal › Article › peer-review
- PublishedDifferential procoagulant effects of saw-scaled viper (Serpentes: Viperidae: Echis) snake venoms on human plasma and the narrow taxonomic ranges of antivenom efficacies
Aymeric, R., Soerensen, C., op den Brouw, B., Lister, C., Dashevsky, D., Arbuckle, K., Gloria, A., Zdenek, C., Casewell, N. R., Gutiérrez, J. M., Wuster, W., Ali, S. A., Masci, P., Rowley, P., Frank, N. & Fry, B. G., 5 Oct 2017, In: Toxicology Letters. 280, 159-170, p. 159-170
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental DNA metabarcoding: transforming how we survey animal and plant communities
Deiner, K., Bik, H. M., Machler, E., Seymour, M., Lacoursiere-Roussel, A., Altermatt, F., Creer, S., Bista, I. & Lodge, D. M., Nov 2017, In: Molecular Ecology Resources. 26, 21, p. 5872-5895
Research output: Contribution to journal › Article › peer-review
- PublishedEvaluation of Molecular Methods for the Detection and Quantification of Pathogen-Derived Nucleic Acids in Sediment
Farkas, K., Hassard, F., McDonald, J., Malham, S. & Jones, D., 24 Jan 2017, In: Frontiers in Microbiology. 6, p. 1-12 53.
Research output: Contribution to journal › Article › peer-review
- PublishedEvaluation of Two Triplex One-Step qRT-PCR Assays for the Quantification of Human Enteric Viruses in Environmental Samples
Farkas, K., Peters, D. E., McDonald, J., de Rougemont, A., Malham, S. & Jones, D., Sept 2017, In: Food and Environmental Virology. 9, 3, p. 342-349
Research output: Contribution to journal › Article › peer-review
- PublishedEvaluation of mesofauna communities as soil quality indicators in a national-level monitoring programme
George, P., Keith, A. M., Creer, S., Barrett, G. L., Lebron, I., Emmett, B. A., Robinson, D. & Jones, D., 1 Dec 2017, In: Soil Biology and Biochemistry. 115, p. 537-546
Research output: Contribution to journal › Article › peer-review
- PublishedEvolutionary genetics of immunological supertypes reveals two faces of the Red Queen
Lighten, J., Papadopulos, A. S. T., Mohammed, R. S., Ward, B. J., Paterson, I., Ballie, L., Bradbury, I. R., Hendry, A. P., Bentzen, P. & van Oosterhout, C., 2017, In: Nature Communications. 1294.
Research output: Contribution to journal › Article › peer-review
- PublishedField-based species identification of closely-related plants using real-time nanopore sequencing
Parker, J., Helmstetter, A. J., Davey, D., Wilkinson, T. & Papadopulos, A. S. T., Aug 2017, In: Scientific Reports. 7, 8345.
Research output: Contribution to journal › Article › peer-review
- PublishedFifty important research questions in microbial ecology
Antwis, R. E., Griffiths, S. M., Harrison, X. A., Aranega-Bou, P., Arce, A., Bettridge, A. S., Brailsford, F., de Menezes, A., Devaynes, A., Forbes, K. M., Fry, E. L., Goodhead, I., Haskell, E., Heys, C., James, C., Johnston, S. R., Lewis, G. R., Lewis, Z., Macey, M. C., McCarthy, A., McDonald, J., Mejia-Florez, N. L., O'Brien, D., Orland, C., Pautasso, M., Reid, W. D. K., Robinson, H. A., Wilson, K. & Sutherland, W. J., May 2017, In: Fems Microbiology Ecology. 93, 5, fix044.
Research output: Contribution to journal › Article › peer-review
- PublishedFirst in vivo Batrachochytrium dendrobatidis transcriptomes reveal mechanisms of host exploitation, host-specific gene expression, and expressed genotype shifts
Ellison, A. R., DiRenzo, G. V., McDonald, C. A., Lips, K. R. & Zamudio, K. R., 1 Jan 2017, In: G3: Genes, Genomes, Genetics. 7, 1, p. 269-278
Research output: Contribution to journal › Article › peer-review
- PublishedGlobal change, parasite transmission and disease control: lessons from ecology
Cable, J., Barber, I., Boag, B., Ellison, A. R., Morgan, E. R., Murray, K., Pascoe, E. L., Sait, S. M., Wilson, A. J. & Booth, M., 13 Mar 2017, In: Philosophical Transactions of The Royal Society B: Biological Sciences. 372, 1719, 20160088.
Research output: Contribution to journal › Article › peer-review
- PublishedHost allometry influences the evolution of parasite host-generalism: theory and meta-analysis
Walker, J. G., Hurford, A., Cable, J., Ellison, A. R., Price, S. J. & Cressler, C. E., 5 May 2017, In: Philosophical Transactions of The Royal Society B: Biological Sciences. 372, 1719
Research output: Contribution to journal › Article › peer-review
- PublishedIdentification of Armillaria species on declined oak in Britain: implications for oak health
Denman, S., Barrett, G., Kirk, S. A., McDonald, J. & Coetzee, M. P. A., 7 Jan 2017, In: Forestry. 90, 1, p. 148-161
Research output: Contribution to journal › Article › peer-review
- PublishedJellyfish on the menu: mtaDNA assay reveals scyphozoan predation in the Irish Sea
Lamb, P. D., Hunter, E., Pinnegar, J. K., Creer, S., Davies, R. G. & Taylor, M. I., 29 Nov 2017, In: Royal Society Open Science.
Research output: Contribution to journal › Article › peer-review
- PublishedLegacy effects of drought on plant–soil feedbacks and plant–plant interactions
Kaisermann, A., de Vries, F. T., Griffiths, R. I. & Bardgett, R. D., 16 Jun 2017, In: New Phytologist. 215, 4, p. 1413-1424 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedLignocellulose-Degrading Microbial Communities in Landfill Sites Represent a Repository of Unexplored Biomass- Degrading Diversity Emma
Ransom-Jones, E., McCarthy, AJ., Haldenby, S., Doonan, J. & McDonald, JE., Aug 2017, In: mSphere. 2, 4, e00300.
Research output: Contribution to journal › Article › peer-review
- PublishedMarine ecology: Genetics from a drop in the ocean
Creer, S. & Seymour, M., 4 Jan 2017, In: Nature Ecology and Evolution. 1, 0037.
Research output: Contribution to journal › Comment/debate
- PublishedMulti-locus phylogeny and species delimitation of Australo-Papuan blacksnakes(Pseudechis Wagler, 1830: Elapidae: Serpentes)
Maddock, S., Childerstone, A., Fry, B. G., Williams, D. J., Barlow, A. & Wüster, W., 1 Feb 2017, In: Molecular Phylogenetics and Evolution. 107, February, p. 48-55
Research output: Contribution to journal › Article › peer-review
- PublishedMultilocus sequence typing provides insights into the population structure and evolutionary potential of Brenneria goodwinii, associated with acute oak decline
Kaczmarek, M., Mullett, M. S., McDonald, J. & Denman, S., 1 Jun 2017, In: PLoS ONE. 12, 6, e0178390.
Research output: Contribution to journal › Article › peer-review
- PublishedNatural History Notes. Naja kaouthia (monocled cobra). Behavior / Spitting.
Santra, V. & Wüster, W., 1 Jun 2017, In: Herpetological Review. 48, 2, p. 455-456 2 p.
Research output: Contribution to journal › Article › peer-review
- PublishedParasitism perturbs the mucosal microbiome of Atlantic Salmon
Llewellyn, M. S., Leadbeater, S., Garcia, C., Sylvain, F-E., Custodio, M., Ang, K. P., Powell, F., Carvalho, G., Creer, S., Elliot, J. & Derome, N., 2017, In: Scientific Reports. 7, 43465.
Research output: Contribution to journal › Article › peer-review
- PublishedPaternity analysis of wild-caught females shows that sperm package size and placement influence fertilization success in the bushcricket Pholidoptera griseoaptera
Parker, D. J., Zaborowska, J., Ritchie, M. G. & Vahed, K., 1 Jun 2017, In: Molecular Ecology. 26, 11, p. 3050-3061 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedPhylogeography of the Central American lancehead Bothrops asper (SERPENTES: VIPERIDAE)
Saldarriaga-Córdoba, M., Parkinson, C. L., Daza, J. M., Wuster, W. & Sasa, M., 27 Nov 2017, In: PLoS ONE. 12, 11, p. 1-20 20 p., e0187969.
Research output: Contribution to journal › Article › peer-review
- PublishedPhysicochemical Factors Influence the Abundance and Culturability of Human Enteric Pathogens and Fecal Indicator Organisms in Estuarine Water and Sediment
Hassard, F., Andrews, A., Jones, D. L., Parsons, L., Jones, V., Cox, B. A., Daldorph, P., Brett, H., McDonald, J. & Malham, S., Oct 2017, In: Frontiers in Microbiology. 8, 1996.
Research output: Contribution to journal › Article › peer-review
- PublishedPlio-Pleistocene phylogeography of the Southeast Asian blue panchax killifish, Aplocheilus panchax.
Beck, S., Carvalho, G., Barlow, A., Ruber, L., Tan, H. H., Nugroho, E., Wowor, D., Nor, S. A. M., Herder, F., Muchlisin, Z. A. & De Bruyn, M., 25 Jul 2017, In: PLoS ONE.
Research output: Contribution to journal › Article › peer-review
- PublishedRevealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
Fonseca, V. G., Sinninger, F., Gaspar, J. M., Quince, C., Creer, S., Power, D., Peck, L. S. & Clark, M. S., 21 Jul 2017, In: Scientific Reports. 7, 6094.
Research output: Contribution to journal › Article › peer-review
- PublishedSeed size and its rate of evolution correlate with species diversification across angiosperms
Igea, J., Miller, E. F., Papadopulos, A. S. T. & Tanentzap, A. J., 2017, In: PLoS Biology. 15, 7, e2002792.
Research output: Contribution to journal › Article › peer-review
- PublishedSoil networks become more connected and take up more carbon as nature restoration progresses
Morriën, E., Hannula, S. E., Snoek, L. B., Helmsing, N. R., Zweers, H., de Hollander, M., Soto, R. L., Bouffaud, M-L., Buée, M., Dimmers, W., Duyts, H., Geisen, S., Girlanda, M., Griffiths, R. I., Jørgensen, H-B., Jensen, J., Plassart, P., Redecker, D., Schmelz, R. M., Schmidt, O., Thomson, B. C., Tisserant, E., Uroz, S., Winding, A., Bailey, M. J., Bonkowski, M., Faber, J. H., Martin, F., Lemanceau, P., de Boer, W., van Veen, J. A. & van der Putten, W. H., 8 Feb 2017, In: Nature Communications. 8, 1, 14349.
Research output: Contribution to journal › Article › peer-review
- PublishedSubtle shifts in microbial communities occur alongside the release of carbon induced by drought and rewetting in contrasting peatland ecosystems
Potter, C., Freeman, C., Golyshin, P., Ackerman, G., Fenner, N., McDonald, J., Ehbair, A., Jones, T., Murphy, L. & Creer, S., Sept 2017, In: Scientific Reports. 7, 11314.
Research output: Contribution to journal › Article › peer-review
- PublishedTaxonomy and identification of bacteria associated with acute oak decline
Brady, C., Arnold, D., McDonald, J. & Denman, S., Jul 2017, In: World Journal of Microbiology and Biotechnology. 33, 7, p. 143
Research output: Contribution to journal › Review article › peer-review
- PublishedThe genetics of mate preferences in hybrids between two young and sympatric Lake Victoria cichlid species
Svensson, O., Woodhouse, K., van Oosterhout, C., Smith, A., Turner, G. & Seehausen, O., 15 Feb 2017, In: Proceedings of the Royal Society B: Biological Sciences. 284, 20162332.
Research output: Contribution to journal › Article › peer-review
- PublishedThe genomic basis of cichlid fish adaptation within the deep water ‘twilight zone’ of Lake Malawi
Hahn, C., Genner, M. J., Turner, G. & Joyce, D. A., 29 Aug 2017, In: Evolution Letters.
Research output: Contribution to journal › Article › peer-review
- PublishedTideless estuaries in brackish seas as possible freshwater-marine transition zones for bacteria: the case study of the Vistula river estuary
Golebiewski, M., Calkiewicz, J., Creer, S. & Piwosz, K., Apr 2017, In: Environmental Microbiology Reports. 9, 2, p. 129-143
Research output: Contribution to journal › Article › peer-review
- PublishedTransitions between phases of genomic differentiation during stick-insect speciation
Riesch, R., Muschick, M., Lindtke, D., Villoutreix, R., Comeault, A. A., Farkas, T. E., Lucek, K., Hellen, E., Soria-Carrasco, V., Dennis, S. R., de Carvalho, C. F., Safran, R. J., Sandoval, C. P., Feder, J., Gries, R., Crespi, B. J., Gries, G., Gompert, Z. & Nosil, P., 17 Feb 2017, In: Nature Ecology and Evolution. 1, 4, p. 82
Research output: Contribution to journal › Article › peer-review
- PublishedUsing DNA metabarcoding to investigate honey bee foraging reveals limited flower use despite high floral availability
De Vere, N., Jones, L. E., Gilmore, T., Moscrop, J., Lowe, A., Smith, D., Hegarty, M. J., Creer, S. & Ford, C. R., 2017, In: Scientific Reports. 7, 42838.
Research output: Contribution to journal › Article › peer-review
- PublishedVenom-on-a-chip: a fast and efficient method for comparative venomics
Zancolli, G., Sanz, L., Calvete, J. J. & Wuster, W., 28 May 2017, In: Toxins. 9, 179, p. 1-15 15 p.
Research output: Contribution to journal › Article › peer-review
2016
- PublishedA common garden design reveals population-specific variability in potential impacts of hybridization between populations of farmed and wild Atlantic salmon, Salmo salar L.
Harvey, A., Glover, K. A., Taylor, M., Creer, S. & Carvalho, G., 1 Mar 2016, In: Evolutionary Applications. 9, 3, p. 435-449
Research output: Contribution to journal › Article › peer-review
- PublishedA method of establishing a transect for biodiversity and ecosystem function monitoring across Europe: Soil biodiversity and ecosystem functions across Europe: A transect covering variations in bio-geographical zones, land use and soil properties
Stone, D., Blomkvist, P., Hendriksen, N. B., Bonkowski, M., Jørgensen, H. B., Carvalho, F., Dunbar, M. B., Gardi, C., Geisen, S., Griffiths, R., Hug, A. S., Jensen, J., Laudon, H., Mendes, S., Morais, P. V., Orgiazzi, A., Plassart, P., Römbke, J., Rutgers, M., Schmelz, R. M., Sousa, J. P., Steenbergen, E., Suhadolc, M., Winding, A., Zupan, M., Lemanceau, P. & Creamer, R. E., Jan 2016, In: Applied Soil Ecology. 97, p. 3-11 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedAbundance and Distribution of Enteric Bacteria and Viruses in Coastal and Estuarine Sediments—a Review
Hassard, F., Gwyther, C. L., Farkas, K., Andrews, A., Jones, V., Cox, B., Brett, H., Jones, D., McDonald, J. & Malham, S., 1 Nov 2016, In: Frontiers in Microbiology.
Research output: Contribution to journal › Article › peer-review
- PublishedAnaerobic choline metabolism in microcompartments promotes growth and swarming of Proteus mirabilis
Jameson, E., Fu, T., Brown, I. R., Paszkiewicz, K., Purdy, K. J., Frank, S. & Chen, Y., 1 Sept 2016, In: Environmental Microbiology. 18, 9, p. 2886-98 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedCharacterising the Canine Oral Microbiome by Direct Sequencing of Reverse-Transcribed rRNA Molecules
McDonald, J., Larsen, N., Pennington, A., Connolly, J., Wallis, C., Rooks, D. J., Hall, N., McCarthy, A. J. & Allison, H. E., 8 Jun 2016, In: PLoS ONE. 11, 6, e0157046.
Research output: Contribution to journal › Article › peer-review
- PublishedCoexisting cryptic species of the Litoditis marina complex (Nematoda) show differential resource use and have distinct microbiomes with high intraspecific variability
Derycke, S., De Meester, N., Rigaux, A., Creer, S., Bik, H. M., Thomas, W. K. & Moens, T., May 2016, In: Molecular Ecology. 25, 9, p. 2093-2110
Research output: Contribution to journal › Article › peer-review
- PublishedColor phenotypes are under similar genetic control in two distantly related species of Timema stick insect
Comeault, A. A., Carvalho, C. F., Dennis, S., Soria-Carrasco, V. & Nosil, P., 21 Jun 2016, In: Evolution. 70, 6, p. 1283-96 14 p.
Research output: Contribution to journal › Article › peer-review
- PublishedConnectivity in the deep: Phylogeography of the velvet belly lanternshark
Gubili, C., Macleod, K., Perry, W., Hanel, P., Batzakas, I., Farrell, E. D., Lynghammar, A., Mancusi, C., Mariani, S., Menezes, G. M., Neat, F., Scarcella, G. & Griffiths, A. M., Sept 2016, In: Deep Sea Research Part I: Oceanographic Research Papers. 115, p. 233-239
Research output: Contribution to journal › Article › peer-review
- PublishedCorrelated evolution of male and female reproductive traits drive a cascading effect of reinforcement in Drosophila yakuba
Comeault, A. A., Venkat, A. & Matute, D. R., 27 Jul 2016, In: Proceedings of the Royal Society B: Biological Sciences. 283, 1835
Research output: Contribution to journal › Article › peer-review
- PublishedDNA-, RNA-, and Protein-Based Stable-Isotope Probing for High-Throughput Biomarker Analysis of Active Microorganisms
Jameson, E., Taubert, M., Coyotzi, S., Chen, Y., Eyice, Ö., Schäfer, H., Murrell, J. C., Neufeld, J. D. & Dumont, M. G., 30 Nov 2016, Metagenomics: Methods and Protocols: 1539 (Methods in Molecular Biology). 2nd ed. New York, NY: Humana Press, Vol. 1539. p. 57-74 18 p. (Methods in Molecular Biology).
Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
- PublishedDecay rates of faecal indicator bacteria from sewage and ovine faeces in brackish and freshwater microcosms with contrasting suspended particulate matter concentrations
Perkins, T. L., Perrow, K. A., Rajko-Nenow, P., Jago, C. F., Jones, D. L., Malham, S. K. & McDonald, J. E., 1 Dec 2016, In: Science of the Total Environment. 572, p. 1645-1652
Research output: Contribution to journal › Article › peer-review
- PublishedDemographic history of speciation in a Senecio altitudinal hybrid zone on Mt. Etna
Filatov, D. A., Osborne, O. G. & Papadopulos, A. S. T., Jun 2016, In: Molecular Ecology. 25, 11, p. 2467-81 15 p.
Research output: Contribution to journal › Article › peer-review
- PublishedDifferences in soil micro-eukaryotic communities over soil pH gradients are strongly driven by parasites and saprotrophs
Dupont, A. Ö. C., Griffiths, R. I., Bell, T. & Bass, D., 15 Jan 2016, In: Environmental Microbiology. 18, 6, p. 2010-2024 15 p.
Research output: Contribution to journal › Article › peer-review
- PublishedDoes density influence relative growth performance of farmed, wild, and F1 hybrid Atlantic salmon in semi-natural and hatchery common garden conditions?
Harvey, A., Carvalho, G., Taylor, M., Solberg, M. F., Creer, S., Dyrhovden, L., Matre, I. H. & Glover, K. A., 6 Jul 2016, In: Royal Society Open Science. 3, 7, 160152.
Research output: Contribution to journal › Article › peer-review
- PublishedDraft Genome Sequence of Clostridium sp. strain W14A isolated from a cellulose-degrading biofilm in a landfill leachate microcosm
Ransom-Jones, E. & McDonald, J., 22 Sept 2016, In: Genome Announcements. 4, 5, e0098516.
Research output: Contribution to journal › Article › peer-review
- PublishedEcological network analysis reveals the inter-connection between soil biodiversity and ecosystem function as affected by land use across Europe: Soil biodiversity and ecosystem functions across Europe: A transect covering variations in bio-geographical zones, land use and soil properties
Creamer, R. E., Hannula, S. E., Leeuwen, J. P. V., Stone, D., Rutgers, M., Schmelz, R. M., Ruiter, P. C. D., Hendriksen, N. B., Bolger, T., Bouffaud, M. L., Buee, M., Carvalho, F., Costa, D., Dirilgen, T., Francisco, R., Griffiths, B. S., Griffiths, R., Martin, F., Silva, P. M. D., Mendes, S., Morais, P. V., Pereira, C., Philippot, L., Plassart, P., Redecker, D., Römbke, J., Sousa, J. P., Wouterse, M. & Lemanceau, P., Jan 2016, In: Applied Soil Ecology. 97, p. 112-124 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedEvaluating genetic traceability methods for captive-bred marine fish and their applications in fisheries management and wildlife forensics
Bylemans, J., Maes, G. E., Diopere, E., Cariani, A., Senn, H., Taylor, M. I., Helyar, S., Bargelloni, L., Bonaldo, A., Carvalho, G., Guarniero, I., Komen, H., Martinsohn, J. T., Nielsen, E. E., Tinti, F., Volckaert, F. A. M. & Ogden, R., 25 Feb 2016, In: Aquaculture Environment Interactions. 8, p. 131-145
Research output: Contribution to journal › Article › peer-review
- PublishedExperimental evidence for beneficial effects of projected climate change on hibernating amphibians
Üveges, B., Mahr, K., Szederkényi, M., Bókony, V., Hoi, H. & Hettyey, A., 27 May 2016, In: Scientific Reports. 6, p. 26754
Research output: Contribution to journal › Article › peer-review
- PublishedFish, genes and genomes: contributions to ecology, evolution and management
Carvalho, G., Hauser, L., Martinsohn, J. & Naish, K., 5 Dec 2016, In: Journal of Fish Biology. 89, 6, p. 2471-2478
Research output: Contribution to journal › Special issue › peer-review
- PublishedGlobal change pressures on soils from land use and management
Smith, P., House, J. I., Bustamante, M., Sobocká, J., Harper, R., Pan, G., West, P. C., Clark, J. M., Adhya, T., Rumpel, C., Paustian, K., Kuikman, P., Cotrufo, M. F., Elliott, J. A., McDowell, R., Griffiths, R. I., Asakawa, S., Bondeau, A., Jain, A. K., Meersmans, J. & Pugh, T. A. M., Mar 2016, In: Global Change Biology. 22, 3, p. 1008-1028 21 p.
Research output: Contribution to journal › Article › peer-review
- PublishedInducing Cold-Sensitivity in the Frigophilic Fly Drosophila montana by RNAi
Vigoder, F. M., Parker, D. J., Cook, N., Tournière, O., Sneddon, T. & Ritchie, M. G., 10 Nov 2016, In: PLoS ONE. 11, 11, e0165724.
Research output: Contribution to journal › Article › peer-review
- PublishedIs Hybridization a Source of Adaptive Venom Variation in Rattlesnakes? A Test, Using a Crotalus scutulatus x viridis Hybrid Zone in Southwestern New Mexico
Zancolli, G., Baker, TI. G., Barlow, A., Bradley, R. K., Calvete, J. J., Carter, K. C., de Jager, K., Owens, J. B., Price, J. F., Sanz, L., Scholes-Higham, A., Shier, L., Wood, L., Wuster, C. & Wüster, W., 16 Jun 2016, In: Toxins. 8, 188, p. 1-16 16 p.
Research output: Contribution to journal › Article › peer-review
- PublishedIsolation studies reveal a shift in the cultivable microbiome of oak affected with Acute Oak Decline
Denman, S., Plummer, S., Peace, A. & McDonald, J., 1 Oct 2016, In: Systematic and Applied Microbiology. 39, 7, p. 484-490
Research output: Contribution to journal › Article › peer-review
- PublishedMapping and validating predictions of soil bacterial biodiversity using European and national scale datasets: Soil biodiversity and ecosystem functions across Europe: A transect covering variations in bio-geographical zones, land use and soil properties
Griffiths, R. I., Thomson, B. C., Plassart, P., Gweon, H. S., Stone, D., Creamer, R. E., Lemanceau, P. & Bailey, M. J., Jan 2016, In: Applied Soil Ecology. 97, p. 61-68 8 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMetagenomic data-mining reveals contrasting microbial populations responsible for trimethylamine formation in human gut and marine ecosystems
Jameson, E., Doxey, A. C., Airs, R., Purdy, K. J., Murrell, J. C. & Chen, Y., 1 Sept 2016, In: Microbial Genomics. 2, 9, e000080.
Research output: Contribution to journal › Article › peer-review
- PublishedNo loss of genetic diversity in the exploited and recently collapsed population of Bay of Biscay anchovy (Engraulis encrasicolus, L.)
Montes, I., Irondo, M., Manzano, C., Santos, M., Conklin, D., Carvalho, G., Irigoien, X. & Estonba, A., May 2016, In: Marine Biology. 163, 98.
Research output: Contribution to journal › Article › peer-review
- PublishedPhylogeny and diversification of mountain vipers (Montivipera, Nilson et al., 2001) triggered by multiple Plio–Pleistocene refugia and high-mountain topography in the Near and Middle East
Stümpel, N., Rajabizadeh, M., Avci, A., Wüster, W. & Joger, U., Aug 2016, In: Molecular Phylogenetics and Evolution. 101, p. 336-351
Research output: Contribution to journal › Article › peer-review
- PublishedPlasticity in growth of farmed and wild Atlantic salmon: is the increased growth rate of farmed salmon caused by evolutionary adaptations to the commercial diet?
Harvey, A., Solberg, M. F., Troianou, E., Carvalho, G., Taylor, M. I., Creer, S., Dyrhovden, L., Matre, I. H. & Glover, K. A., 1 Dec 2016, In: BMC Evolutionary Biology. 2016, 16, 264.
Research output: Contribution to journal › Article › peer-review
- PublishedPlasticity in response to feed availability: Does feeding regime influence the relative growth performance of domesticated, wild and hybrid Atlantic salmon Salmo salar parr?
Harvey, A., Solberg, M. F., Glover, K. A., Taylor, M. I., Creer, S. & Carvalho, G., 1 Sept 2016, In: Journal of Fish Biology. 89, 3, p. 1754-1768
Research output: Contribution to journal › Article › peer-review
- PublishedPreparing for Winter: The Transcriptomic Response Associated with Different Day Lengths in Drosophila montana
Parker, D. J., Ritchie, M. G. & Kankare, M., 3 May 2016, In: G3: Genes, Genomes, Genetics. 6, 5, p. 1373-81 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedRecent developments in rattlesnake phylogenetics, phylogeography and species delimitation
Wüster, W., 2016, Rattlesnakes of Arizona. Schuett, G. W., Feldner, M. J., Smith, C. F. & Reiserer, R. S. (eds.). Rodeo, New Mexico: Eco Publishing, Vol. 2. p. 9 29 p.
Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
- PublishedReinforcement's incidental effects on reproductive isolation between conspecifics
Comeault, A. A. & Matute, D. R., Apr 2016, In: Current zoology. 62, 2, p. 135-143 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSelecting cost effective and policy-relevant biological indicators for European monitoring of soil biodiversity and ecosystem function
Griffiths, B. S., Römbke, J., Schmelz, R. M., Scheffczyk, A., Faber, J. H., Bloem, J., Pérès, G., Cluzeau, D., Chabbi, A., Suhadolc, M., Sousa, J. P., Martins da Silva, P., Carvalho, F., Mendes, S., Morais, P., Francisco, R., Pereira, C., Bonkowski, M., Geisen, S., Bardgett, R. D., de Vries, F. T., Bolger, T., Dirilgen, T., Schmidt, O., Winding, A., Hendriksen, N. B., Johansen, A., Philippot, L., Plassart, P., Bru, D., Thomson, B., Griffiths, R. I., Bailey, M. J., Keith, A., Rutgers, M., Mulder, C., Hannula, S. E., Creamer, R. & Stone, D., Oct 2016, In: Ecological Indicators. 69, p. 213-223 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedShotgun Metagenomic Sequencing Analysis of Soft-Rot Enterobacteriaceae in Polymicrobial Communities
Doonan, J., Denman, S., McDonald, J. & Golyshin, P., 30 Nov 2016, Metagenomics. Streit, W. R. & Daniel, R. (eds.). Springer New York, Vol. 1539. p. 85-97 (Methods in Molecular Biology; vol. 1539).
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedSoil Fungal:Bacterial Ratios Are Linked to Altered Carbon Cycling
Malik, A. A., Chowdhury, S., Schlager, V., Oliver, A., Puissant, J., Vazquez, P. G. M., Jehmlich, N., von Bergen, M., Griffiths, R. I. & Gleixner, G., 9 Aug 2016, In: Frontiers in Microbiology. 7
Research output: Contribution to journal › Article › peer-review
- PublishedSpatial patterns and environmental constraints on ecosystem services at a catchment scale
Emmett, B., Cooper, D., Smart, S., Jackson, B., Thomas, A., Cosby, B., Evans, C., Glanville, H., McDonald, J., Malham, S., Marshall, M., Jarvis, S., Rajko-Nenow, P., Webb, G. P., Ward, S., Rowe, E., Jones, L., Vanbergen, E. J., Keith, A., Carter, H., Pereira, M. G., Hughes, S., Lebron, I., Wade, A. & Jones, D., 1 Dec 2016, In: Science of the Total Environment. 572, p. 1586-1600
Research output: Contribution to journal › Article › peer-review
- PublishedSpecies distribution modelling leads to the discovery of new populations of one of the least known European snakes, Vipera ursinii graeca, in Albania
Mizsei, E., Uveges, B., Vagi, B., Szabolcs, M., Lengyel, S., Pfliegler, W. P., Nagy, Z. T. & Toth, J. P., 17 Feb 2016, In: Amphibia-Reptilia. 37, 1, p. 55-68
Research output: Contribution to journal › Article › peer-review
- PublishedThe biogeography of the atlantic salmon (Salmo salar) gut microbiome
Llewellyn, M. S., McGinnity, P., Dionne, M., Letourneau, J., Thonier, F., Carvalho, G., Creer, S. & Derome, N., May 2016, In: ISME Journal. 10, p. 1280-1284
Research output: Contribution to journal › Article › peer-review
- PublishedThe ecologist’s field guide to sequence-based identification of biodiversity
Creer, S., Deiner, K., Frey, S., Porazinska, D., Taberlet, P., Thomas, W. K., Potter, C. & Bik, H. M., 13 Sept 2016, In: Methods in Ecology and Evolution. 7, p. 1008-1018 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedTranscriptional Differences between Diapausing and Non-Diapausing D. montana Females Reared under the Same Photoperiod and Temperature
Kankare, M., Parker, D. J., Merisalo, M., Salminen, T. S. & Hoikkala, A., 29 Aug 2016, In: PLoS ONE. 11, 8, p. e0161852
Research output: Contribution to journal › Article › peer-review
- PublishedUse of Mytilus edulis biosentinels to investigate spatial patterns of norovirus and faecal indicator organism contamination around coastal sewage discharges
Winterbourn, J., Clements, K., Lowther, J. A., Malham, S., McDonald, J. & Jones, D., 15 Nov 2016, In: Water Research. 105, November, p. 241-250
Research output: Contribution to journal › Article › peer-review
- PublishedVariation in Chemical Defense Among Natural Populations of Common Toad, Bufo bufo, Tadpoles: the Role of Environmental Factors
Bókony, V., Móricz, Á. M., Tóth, Z., Gál, Z., Kurali, A., Mikó, Z., Pásztor, K., Szederkényi, M., Tóth, Z., Ujszegi, J., Üveges, B., Krüzselyi, D., Capon, R. J., Hoi, H. & Hettyey, A., 8 Apr 2016, In: Journal of Chemical Ecology. 42, 4, p. 329-38 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedViviparity stimulates diversification in an order of fish
Helmstetter, A. J., Papadopulos, A. S. T., Igea, J., Van Dooren, T. J. M., Leroi, A. M. & Savolainen, V., 12 Apr 2016, In: Nature Communications. 7, 11271.
Research output: Contribution to journal › Article › peer-review
- PublishedWorldwide Analysis of Sedimentary DNA Reveals Major Gaps in Taxonomic Knowledge of Deep-Sea Benthos
Sinniger, F., Pawlowski, J., Harii, S., Gooday, A. J., Yamamoto, H., Chevaldonne, P., Cedhagen, T., Carvalho, G. & Creer, S., 14 Jun 2016, In: Frontiers in Marine Science. 3, 92
Research output: Contribution to journal › Article › peer-review
2015
- PublishedA comparative analysis of island floras challenges taxonomy-based biogeographical models of speciation
Igea, J., Bogarín, D., Papadopulos, A. S. T. & Savolainen, V., Feb 2015, In: Evolution. 69, 2, p. 482-91 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedA new species of death adder (Acanthophis: Serpentes: Elapidae) from north-western Australia
Wuster, W., Maddock, S. T., Ellis, R. J., Doughty, P., Smith, L. A. & Wüster, W., 28 Aug 2015, In: Zootaxa. 4007, 3, p. 301-326
Research output: Contribution to journal › Article › peer-review
- PublishedBiogeochemical cycles and biodiversity as key drivers of ecosystem services provided by soils
Smith, P., Cotrufo, M. F., Rumpel, C., Paustian, K., Kuikman, P. J., Elliott, J. A., McDowell, R., Griffiths, R. I., Asakawa, S., Bustamante, M., House, J. I., Sobocká, J., Harper, R., Pan, G., West, P. C., Gerber, J. S., Clark, J. M., Adhya, T., Scholes, R. J. & Scholes, M. C., 19 Nov 2015, In: SOIL. 1, 2, p. 665-685 21 p.
Research output: Contribution to journal › Article › peer-review
- PublishedCatchment-scale biogeography of riverine bacterioplankton
Read, D. S., Gweon, H. S., Bowes, M. J., Newbold, L. K., Field, D., Bailey, M. J. & Griffiths, R. I., Feb 2015, In: The ISME Journal. 9, 2, p. 516-526 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedConvergence of multiple markers and analysis methods defines the genetic distinctiveness of cryptic pitvipers
Mrinalini, M., Thorpe, R. S., Creer, S., Lallias, D. S., Dawnay, L., Stuart, B. L. & Malhotra, A., 8 Jul 2015, In: Molecular Phylogenetics and Evolution. 92, p. 266-279
Research output: Contribution to journal › Article › peer-review
- PublishedEpigenetic regulation of sex ratios may explain natural variation in self-fertilization rates
Ellison, A., Rodriguez Lopez, C. M., Moran, P., Breen, J., Swain, M., Megias, M., Hegarty, M., Wilkinson, M., Pawluk, R. & Consuegra, S., 22 Nov 2015, In: Proceedings of the Royal Society B: Biological Sciences. 282, 1819, 20151900.
Research output: Contribution to journal › Article › peer-review
- PublishedGene-associated markers can assign origin in a weakly structured fish, Atlantic herring
Bekkevold, D., Helyar, S. J., Limborg, M. T., Nielsen, E. E., Hemmer-Hansen, J., Clausen, L. A. & Carvalho, G. R., 23 Feb 2015, In: ICES Journal of Marine Science. 72, 6, p. 1790-1810
Research output: Contribution to journal › Article › peer-review
- PublishedGenomic islands of speciation separate cichlid ecomorphs in an East African crater lake
Malinsky, M., Challis, R. J., Tyers, A. M., Schiffels, S., Terai, Y., Ngatunga, B. P., Miska, E. A., Durbin, R., Genner, M. J. & Turner, G. F., 18 Dec 2015, In: Science. 350, 6267, p. 1493-1498
Research output: Contribution to journal › Article › peer-review
- PublishedGeographical ancestry of Lake Malawi's cichlid fish diversity
Genner, M. J., Ngatunga, B. P., Mzighani, S., Smith, A. & Turner, G. F., 10 Jun 2015, In: Biology Letters. 11, 6, p. Article Number: 20150232
Research output: Contribution to journal › Article › peer-review
- PublishedHow consistent are the transcriptome changes associated with cold acclimation in two species of the Drosophila virilis group?
Parker, D. J., Vesala, L., Ritchie, M. G., Laiho, A., Hoikkala, A. & Kankare, M., 1 Jul 2015, In: Heredity. 115, 1, p. 13-21
Research output: Contribution to journal › Article › peer-review
- PublishedImpact of climate change on UK estuaries: A review of past trends and potential projections
Robins, P. E., Skov, M. W., Lewis, M. J., Gimenez, L., Davies, A. G., Malham, S. K., Neill, S. P., McDonald, J. E., Whitton, T. A., Jackson, S. E. & Jago, C. F., 17 Dec 2015, In: Estuarine, Coastal and Shelf Science. 169, p. 119-135
Research output: Contribution to journal › Article › peer-review
- PublishedMapping natural capital: optimising the use of national scale datasets
Henrys, P. A., Bee, E. J., Watkins, J. W., Smith, N. A. & Griffiths, R. I., Jun 2015, In: Ecography. 38, 6, p. 632-638 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMore than Skin Deep: Functional Genomic Basis for Resistance to Amphibian Chytridiomycosis
Ellison, A. R., Tunstall, T., DiRenzo, G. V., Hughey, M. C., Rebollar, E. A., Belden, L. K., Harris, R. N., Ibanez, R., Lips, K. R. & Zamudio, K. R., Jan 2015, In: Genome Biology and Evolution. 7, 1, p. 286-298
Research output: Contribution to journal › Article › peer-review
- PublishedNatural History Notes: Crotalus scutulatus (Mohave rattlesnake). Maximum size.
Mrinalini, N. V., Hicks, J. J. & Wüster, W., 1 Jun 2015, In: Herpetological Review. 46, 2, p. 271 1 p.
Research output: Contribution to journal › Article › peer-review
- PublishedOceanography and life history predict contrasting genetic population structure in two Antarctic fish species
Young, E. F., Belchier, M., Hauser, L., Horsburgh, G. J., Meredith, M. P., Murphy, E. J., Pascoal, S., Rock, J., Tysklind, N. & Carvalho, G. R., 16 Apr 2015, In: Evolutionary Applications. 8, 5, p. 486-509
Research output: Contribution to journal › Article › peer-review
- PublishedPIPITS: an automated pipeline for analyses of fungal internal transcribed spacer sequences from the Illumina sequencing platform
Gweon, H. S., Oliver, A., Taylor, J., Booth, T., Gibbs, M., Read, D. S., Griffiths, R. I. & Schonrogge, K., 22 Apr 2015, In: Methods in Ecology and Evolution. 6, 8, p. 973-980 8 p.
Research output: Contribution to journal › Article › peer-review
- PublishedPlant diversity increases soil microbial activity and soil carbon storage
Lange, M., Eisenhauer, N., Sierra, C. A., Bessler, H., Engels, C., Griffiths, R. I., Mellado-Vázquez, P. G., Malik, A. A., Roy, J., Scheu, S., Steinbeiss, S., Thomson, B. C., Trumbore, S. E. & Gleixner, G., 7 Apr 2015, In: Nature Communications. 6, 1, 6707.
Research output: Contribution to journal › Article › peer-review
- PublishedPresence of Acapoeta tanganicae (Actinopterygii: Cypriniformes: Cyprinidae ) within the Lake Rukwa catchment supports historic riverine connectivity with Lake Tanganyika
Genner, M. J., Turner, G. F., Smith, A., Mzighani, S. & Ngatunga, B. P., 31 Mar 2015, In: Acta Ichthyologica Et Piscatoria. 45, 1, p. 109-112
Research output: Contribution to journal › Article › peer-review
- PublishedRapid Y degeneration and dosage compensation in plant sex chromosomes
Papadopulos, A. S. T., Chester, M., Ridout, K. & Filatov, D. A., 20 Oct 2015, In: Proceedings of the National Academy of Sciences of the United States of America. 112, 42, p. 13021-6 6 p.
Research output: Contribution to journal › Article › peer-review
- PublishedRhizosphere bacterial carbon turnover is higher in nucleic acids than membrane lipids: implications for understanding soil carbon cycling
Malik, A. A., Dannert, H., Griffiths, R. I., Thomson, B. C. & Gleixner, G., 9 Apr 2015, In: Frontiers in Microbiology. 6
Research output: Contribution to journal › Article › peer-review
- PublishedSelection on a Genetic Polymorphism Counteracts Ecological Speciation in a Stick Insect
Comeault, A. A., Flaxman, S. M., Riesch, R., Curran, E., Soria-Carrasco, V., Gompert, Z., Farkas, T. E., Muschick, M., Parchman, T. L., Schwander, T., Slate, J. & Nosil, P., 3 Aug 2015, In: Current Biology. 25, 15, p. 1975-1981
Research output: Contribution to journal › Article › peer-review
- PublishedSoil conditions and land use intensification effects on soil microbial communities across a range of European field sites
Thomson, B. C., Tisserant, E., Plassart, P., Uroz, S., Griffiths, R. I., Hannula, S. E., Buée, M., Mougel, C., Ranjard, L., Veen, J. A. V., Martin, F., Bailey, M. J. & Lemanceau, P., Sept 2015, In: Soil Biology and Biochemistry. 88, p. 403-413 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe Genome and Methylome of a Beetle with Complex Social Behavior, Nicrophorus vespilloides (Coleoptera: Silphidae)
Cunningham, C. B., Ji, L., Wiberg, R. A. W., Shelton, J., McKinney, E. C., Parker, D. J., Meagher, R. B., Benowitz, K. M., Roy-Zokan, E. M., Ritchie, M. G., Brown, S. J., Schmitz, R. J. & Moore, A. J., 9 Oct 2015, In: Genome Biology and Evolution. 7, 12, p. 3383-96 14 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe evolution, diversity, and host associations of rhabdoviruses
Longdon, B., Murray, G. G. R., Palmer, W. J., Day, J. P., Parker, D. J., Welch, J. J., Obbard, D. J. & Jiggins, F. M., 1 Mar 2015, In: Virus Evolution. 1, 1, vev014.
Research output: Contribution to journal › Article › peer-review
- PublishedThe importance of being genomic: Non-coding and coding sequences suggest different models of toxin multi-gene family evolution
Malhotra, A., Creer, S., Harris, J. B. & Thorpe, R. S., 7 Sept 2015, In: Toxicon. 107, Part B, p. 344-358
Research output: Contribution to journal › Article › peer-review
- PublishedThe intergenic transcribed spacer region 1 as a molecular marker for identification and discrimination of Enterobacteriaceae associated with acute oak decline
Doonan, J., Denman, S., Gertler, C., Pachebat, J. A., Golyshin, P. N. & McDonald, J. E., 1 Jan 2015, In: Journal of Applied Microbiology. 118, 1, p. 193-201 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe origin and evolution of the Toxicofera reptile venom system.
Fry, B. G., Sunagar, K., Casewell, N. R., Kochva, E., Roelants, K., Scheib, H., Wüster, W., Vidal, N., Young, B., Burbink, F., Pyron, R. A., Vonk, F. J. & Jackson, T. N. W., Dec 2015, Venomous Reptiles and Their Toxins: Evolution, Pathophysiology and Biodiscovery. Fry, B. G. (ed.). Oxford: Oxford: OUP, p. 1 31 p.
Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
- PublishedTiming of population expansions within the Lake Malawi haplochromine cichlid fish radiation
Genner, M. J. & Turner, G. F., 1 Apr 2015, In: Hydrobiologia. 748, 1, p. 121-132
Research output: Contribution to journal › Article › peer-review
- PublishedTranscriptomes of parents identify parenting strategies and sexual conflict in a subsocial beetle
Parker, D. J., Cunningham, C. B., Walling, C. A., Stamper, C. E., Head, M. L., Roy-Zokan, E. M., McKinney, E. C., Ritchie, M. G. & Moore, A. J., 29 Sept 2015, In: Nature Communications. 6, p. 8449
Research output: Contribution to journal › Article › peer-review
- PublishedUsing chemical, microbial and fluorescence techniques to understand contaminant sources and pathways to wetlands in a conservation site
Rhymes, J. M., Rhymes, J., Jones, L., Lapworth, D. J., White, D., Fenner, N., McDonald, J. E. & Perkins, T. L., 20 Jan 2015, In: Science of the Total Environment. 511, p. 703-710
Research output: Contribution to journal › Article › peer-review
- PublishedVegetation exerts a greater control on litter decomposition than climate warming in peatlands
Ward, S. E., Orwin, K. H., Ostle, N. J., Briones, M. J. I., Thomson, B. C., Griffiths, R. I., Oakley, S., Quirk, H. & Bardgett, R. D., 1 Jan 2015, In: Ecology. 96, 1, p. 113-123 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedWidespread convergence in toxin resistance by predictable molecular evolution
Wuster, W., Ujvari, B., Casewell, N. R., Sunagar, K., Arbuckle, K., Wüster, W., Lo, N., O'Meally, D., Beckmann, C., King, G. F., Deplazes, E. & Madsen, T., 22 Sept 2015, In: Proceedings of the National Academy of Sciences of the USA. 112, 38, p. 11911-11916
Research output: Contribution to journal › Article › peer-review
- PublishedWidespread parallel population adaptation to climate variation across a radiation: implications for adaptation to climate change
Thorpe, R. S., Barlow, A., Malhotra, A. & Surget-Groba, Y., 16 Feb 2015, In: Molecular Ecology. 24, 5, p. 1019-1030
Research output: Contribution to journal › Article › peer-review
2014
- PublishedA critique of Rossberg et al.: noise obscures the genetic signal of meiobiotal ecospecies in ecogenomic datasets
Morgan, M. J., Bass, D., Bik, H., Birky, C. W., Blaxter, M., Crisp, M. D., Derycke, S., Fitch, D., Fonteaneto, D., Hardy, C. M., King, A. J., Kiontke, K. C., Moens, T., Pawlowski, J. W., Porazinska, D., Tang, C. Q., Thomas, W. K., Yeates, D. K. & Creer, S., 26 Mar 2014, In: Proceedings of the Royal Society B: Biological Sciences. 281, 1783, p. 20133076
Research output: Contribution to journal › Article › peer-review
- PublishedA reliable DNA barcode reference library for the identification of the North European shelf fish fauna
Knebelsberger, T., Landi, M., Neumann, H., Sell, A. F., Campbell, P. D., Laakmann, S., Raupach, M. J., Carvalho, G. R. & Costa, F. O., 12 Mar 2014, In: Molecular Ecology Resources. 14, 5, p. 1060-1071
Research output: Contribution to journal › Article › peer-review
- PublishedBorneo and Indochina are Major Evolutionary Hotspots for Southeast Asian Biodiversity
De Bruyn, M., de Bruyn, M., Stelbrink, B., Morley, R. J., Hall, R., Carvalho, G. R., Cannon, C. H., van den Bergh, G., Meijaard, E., Metcalfe, I., Boitani, L., Maiorano, L. & Shoup, R. V., 30 Nov 2014, In: Systematic Biology. 63, 6, p. 879-901
Research output: Contribution to journal › Article › peer-review
- PublishedCarnitine metabolism to trimethylamine by an unusual Rieske-type oxygenase from human microbiota
Zhu, Y., Jameson, E., Crosatti, M., Schäfer, H., Rajakumar, K., Bugg, T. D. H. & Chen, Y., 18 Mar 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 11, p. 4268-73 6 p.
Research output: Contribution to journal › Article › peer-review
- PublishedComments on Spracklandus Hoser, 2009 (Reptilia, Serpentes, ELAPIDAE): request for confirmation of the availability of the generic name and for the nomenclatural validation of the journal in which it was published [Case 3601]
Wuster, W., Wüster, W., Broadley, D. G. & Wallach, V., 1 Mar 2014, In: Bulletin of Zoological Nomenclature. 71, 1, p. 37-38
Research output: Contribution to journal › Article › peer-review
- PublishedConservation and divergence in the frog immunome: pyrosequencing and de novo assembly of immune tissue transcriptomes
Savage, A. E., Kiemnec-Tyburczy, K. M., Ellison, A. R., Fleischer, R. C. & Zamudio, K. R., 1 Jun 2014, In: Gene. 542, 2, p. 98-108
Research output: Contribution to journal › Article › peer-review
- PublishedCorrelates of hyperdiversity in southern African ice plants (Aizoaceae)
Valente, L. M., Britton, A. W., Powell, M. P., Papadopulos, A. S. T., Burgoyne, P. M. & Savolainen, V., Jan 2014, In: Botanical Journal of the Linnean Society. 174, 1, p. 110-129 20 p.
Research output: Contribution to journal › Article › peer-review
- PublishedDNA barcoding for species assignment: the case of Mediterranean marine fishes
Carvalho, G. R., Landi, M. D., Arculeo, M., Biondo, G., Martins, R. & Carneiro, M., 15 Sept 2014, In: PLoS ONE. 9, 9
Research output: Contribution to journal › Article › peer-review
- PublishedDeveloping Skills in Second Year Biological Science Undergraduates
Robinson, R. L. & McDonald, J. E., 1 Jul 2014, In: Bioscience Education. 22, 1, p. 42-53
Research output: Contribution to journal › Article › peer-review
- PublishedDistribution and diversity of members of the bacterial phylum Fibrobacteres in environments where cellulose degradation occurs
Ransom-Jones, E., Jones, D. L., Edwards, A. & McDonald, J. E., 17 Jul 2014, In: Systematic and Applied Microbiology. 37, 7, p. 502-509
Research output: Contribution to journal › Article › peer-review
- PublishedEnhancing first year undergraduate student engagement via the School of Biological Sciences tutorials module
McDonald, J. E. & Robinson, R. L., 1 Jul 2014, In: Bioscience Education. 22, 1, p. 54-69
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental DNA for Wildlife Biology and Biodiversity Monitoring
Evans, A. R., Bohmann, K., Evans, A., Gilbert, M. T., Carvalho, G. R., Creer, S., Knapp, M., Yu, D. W. & De Bruyn, M., 10 May 2014, In: Trends in Ecology and Evolution. 29, 6, p. 358-367
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental metabarcoding reveals heterogeneous drivers of microbial eukaryote diversity in contrasting estuarine ecosystems
Lallias, D. S., Lallias, D., Hiddink, J. G., Fonseca, V. G., Gaspar, J. M., Sung, W., Neill, S. P., Barnes, N., Ferrero, T., Hall, N., Lambshead, P. J., Packer, M., Thomas, W. K. & Creer, S., 25 Nov 2014, In: The ISME Journal. 9, p. 1208-1221
Research output: Contribution to journal › Article › peer-review
- PublishedEvaluation of genetic isolation within an island flora reveals unusually widespread local adaptation and supports sympatric speciation
Papadopulos, A. S. T., Kaye, M., Devaux, C., Hipperson, H., Lighten, J., Dunning, L. T., Hutton, I., Baker, W. J., Butlin, R. K. & Savolainen, V., 5 Aug 2014, In: Philosophical Transactions of The Royal Society B: Biological Sciences. 369, 1648, p. 1-10
Research output: Contribution to journal › Article › peer-review
- PublishedEvidence for lacustrine breeding by sanjika Opsaridium microcephalum (Teleostei: Cyprinidae) in Lake Malawi
Tweddle, D. & Turner, G. F., 23 Dec 2014, In: African Journal of Aquatic Science. 39, 4, p. 479-480
Research output: Contribution to journal › Article › peer-review
- PublishedFighting a Losing Battle: Vigorous Immune Response Countered by Pathogen Suppression of Host Defenses in the Chytridiomycosis-Susceptible Frog Atelopus zeteki
Ellison, A. R., Savage, A. E., DiRenzo, G. V., Langhammer, P., Lips, K. R. & Zamudio, K. R., 1 Jul 2014, In: G3: Genes, Genomes, Genetics. 4, 7, p. 1275-1289
Research output: Contribution to journal › Article › peer-review
- PublishedFish Product Mislabelling: Failings of Traceability in the Production Chain and Implications for Illegal, Unreported and Unregulated (IUU) Fishing
De Bruyn, M., Helyar, S. J., Lloyd, H., de Bruyn, M., Leake, J., Bennett, N. & Carvalho, G. R., 12 Jun 2014, In: PLoS ONE. 9, 6, p. e98691
Research output: Contribution to journal › Article › peer-review
- PublishedIdentification and characterization of trimethylamine N-oxide (TMAO) demethylase and TMAO permease in Methylocella silvestris BL2
Zhu, Y., Jameson, E., Parslow, R. A., Lidbury, I., Fu, T., Dafforn, T. R., Schäfer, H. & Chen, Y., 1 Oct 2014, In: Environmental Microbiology. 16, 10, p. 3318-30 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedImpacts of Climatic Factors on Evolution of Molecular Diversity and the Natural Distribution of Wild Stocks of the Giant Freshwater Prawn (Macrobrachium rosenbergii)
De Bruyn, M., Hurwood, D. A., Dammannagoda, S., Krosch, M. N., Jung, H., Salin, K. R., Youssef, M. A. & De Bruyn, M. M., 22 Jan 2014, In: Freshwater science. 33, 1, p. 217-231
Research output: Contribution to journal › Article › peer-review
- PublishedLooking forward through the past: identification of 50 priority research questions in palaeoecology
De Bruyn, M., Seddon, A. W., Mackay, A. W., Baker, A. G., Birks, H. J., Breman, E., Buck, C. E., Ellis, E. C., Froyd, C. A., Gill, J. A., Gillson, L., Johnson, E. A., Jones, V. J., Juggins, S., Macias-Fauria, M., Mills, K., Morris, J. L., Nogues-Bravo, D., Punyasena, S. W., Roland, T. P., Tanentzap, A. J., Willis, K. J., Aberhan, M., van Asperen, E. N., Austin, W. E., Battarbee, R. W., Bhagwat, S., Balanger, C. L., Bennett, K. D., Birks, H. H., Bronk Ramsey, C., Brooks, S. J., de Bruyn, M., Butler, P. G., Chambers, F. M., Clarke, S. J., Davies, A. L., Dearing, J. A., Ezard, T. H., Fuerdean, A., Flower, R. J., Gell, P., Hausmann, S., Hogan, E. J., Hopkins, M. J., Jeffers, E. S., Korhola, A. A., Marchant, R., Kiefer, T., Lamentowicz, M., Larocque-Tobler, I., Lopez-Merino, L., Liow, L. H., McGowan, S., Miller, J. H., Montoya, E., Morton, O., Nogue, S., Onoufriou, C., Boush, L. P., Rodriguez-Sanchez, F., Rose, N. L., Sayer, C. D., Shaw, H. E., Payne, R., Simpson, G., Sohar, K., Whitehouse, N. J., Williams, J. W. & Witkowski, A., 1 Jan 2014, In: Journal of Ecology. 102, 1, p. 256-267
Research output: Contribution to journal › Article › peer-review
- PublishedMale-specific fruitless isoforms target neurodevelopmental genes to specify a sexually dimorphic nervous system
Neville, M. C., Nojima, T., Ashley, E., Parker, D. J., Walker, J., Southall, T., Van de Sande, B., Marques, A. C., Fischer, B., Brand, A. H., Russell, S., Ritchie, M. G., Aerts, S. & Goodwin, S. F., 3 Feb 2014, In: Current Biology. 24, 3, p. 229-41 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMedically important differences in snake venom composition are dictated by distinct postgenomic mechanisms
Wuster, W., Casewell, N. R., Wagstaff, S. C., Wüster, W., Cook, D. A., Bolton, F. M., King, S. I., Plan, D., Sanz. L., N. V., Calvete, J. J. & Harrison, R. A., 9 Jun 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 25, p. 9205-9210
Research output: Contribution to journal › Article › peer-review
- PublishedMetagenetic analysis of patterns of distribution and diversity of marine meiobenthic eukaryotes
Fonseca, V. G., Carvalho, G. R., Nichols, B., Quince, C., Johnson, H. F., Neill, S. P., Lambshead, J. D., Thomas, W. K., Power, D. M. & Creer, S., 25 Aug 2014, In: Global Ecology and Biogeography. 23, 11, p. 1293–1302
Research output: Contribution to journal › Article › peer-review
- PublishedPeripheral isolate speciation of a Lake Malawi cichlid fish from shallow muddy habitats
Griggs, C. A., Tyers, A. M., Bavin, D., Cooke, G. M., Griggs, C. & Turner, G. F., 16 Mar 2014, In: Evolutionary Biology. 41, 3, p. 439-451
Research output: Contribution to journal › Article › peer-review
- PublishedRapid increase in southern elephant seal genetic diversity after a founder event
De Bruyn, M., Pinsky, M. L., Hall, B., Koch, P., Baroni, C. & Hoelzel, A. R., 29 Jan 2014, In: Proceedings of the Royal Society B: Biological Sciences. 281, 1779, p. 20133078
Research output: Contribution to journal › Article › peer-review
- PublishedSediment Composition Influences Spatial Variation in the Abundance of Human Pathogen Indicator Bacteria within an Estuarine Environment
Perkins, T. L., Clements, K., Baas, J. H., Jago, C. F., Jones, D. L., Malham, S. K. & McDonald, J. E., 14 Nov 2014, In: PLoS ONE. 9, 11
Research output: Contribution to journal › Article › peer-review
- PublishedStick insect genomes reveal natural selection's role in parallel speciation
Soria-Carrasco, V., Gompert, Z., Comeault, A. A., Farkas, T. E., Parchman, T. L., Johnston, J. S., Buerkle, C. A., Feder, J. L., Bast, J., Schwander, T., Egan, S. P., Crespi, B. J. & Nosil, P., 16 May 2014, In: Science. 344, 6185, p. 738-42 5 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe evolution of novelty in conserved genes; evidence of positive selection in the Drosophila fruitless gene is localised to alternatively spliced exons
Parker, D. J., Gardiner, A., Neville, M. C., Ritchie, M. G. & Goodwin, S. F., 1 Mar 2014, In: Heredity. 112, 3, p. 300-306
Research output: Contribution to journal › Article › peer-review
- PublishedThe interaction of human microbial pathogens, particulate material and nutrients in estuarine environments and their impacts on recreational and shellfish waters
Malham, S. K., Rajko-Nenow, P., Howlett, E., Tuson, K. E., Perkins, T. L., Pallett, D. W., Wang, H., Jago, C. F., Jones, D. L. & McDonald, J. E., 7 Jul 2014, In: Environmental Science: Processes and Impacts. 16, p. 2145-2155
Research output: Contribution to journal › Article › peer-review
2013
- PublishedA genomic island linked to ecotype divergence in Atlantic cod
Hemmer-Hansen, J., Nielsen, E. E., Therkildsen, N. O., Taylor, M. I., Ogden, R., Geffen, A. J., Bekkevold, D., Helyar, S., Pampoulie, C., Johansen, T., FishPopTrace Consortium, N. V. & Carvalho, G. R., 1 May 2013, In: Molecular Ecology. 22, 10, p. 2653-2667
Research output: Contribution to journal › Article › peer-review
- PublishedBalancing selection and the maintenance of MHC supertype variation in a selfing vertebrate
Consuegra, S., Ellison, A., Allainguillaume, J., Pachebat, J., Peat, K. M. & Wright, P., 7 Mar 2013, In: Proceedings of the Royal Society B: Biological Sciences. 280, 1754
Research output: Contribution to journal › Editorial › peer-review
- PublishedBest practices: in the 21st Century, taxonomic decisions in herpetology are acceptable only when supported by a body of evidence and published via peer-review
Wuster, W., Kaiser, H., Crother, B. I., Kelly, C. M., Luiselli, L., O’Shea, M., Ota, H., Passos, P., Schleip, W. D. & Wüster, W., 1 Jan 2013, In: Herpetological Review. 44, p. 8-23
Research output: Contribution to journal › Article › peer-review
- PublishedBioreduction of Sheep Carcasses Effectively Contains and Reduces Pathogen Levels under Operational and Simulated Breakdown Conditions
Golyshin, P., Gwyther, C. L., Jones, D. L., Golyshin, P. N., Edwards-Jones, G., McKillen, J., McNair, I., McDonald, J. E. & Williams, A. P., 21 May 2013, In: Environmental Science and Technology. 47, 10, p. 5267–5275
Research output: Contribution to journal › Article › peer-review
- PublishedCan Long-Range PCR Be Used to Amplify Genetically Divergent Mitochondrial Genomes for Comparative Phylogenetics? A Case Study within Spiders (Arthropoda: Araneae)
Briscoe, A. G., Goodacre, S., Masta, S. E., Taylor, M. I., Arnedo, M. A., Penney, D., Kenny, J. & Creer, S., 8 May 2013, In: PLoS ONE. 8, 5, p. e62404
Research output: Contribution to journal › Article › peer-review
- PublishedChoosy males could help explain androdioecy in a selfing fish
Ellison, A., Jones, J., Inchley, C. & Consuegra, S., 1 Jun 2013, In: American Naturalist. 181, 6
Research output: Contribution to journal › Article › peer-review
- PublishedCodon usage bias and effective population sizes on the X chromosome versus the autosomes in Drosophila melanogaster
Campos, J. L., Zeng, K., Parker, D. J., Charlesworth, B. & Haddrill, P. R., 1 Apr 2013, In: Molecular Biology and Evolution. 30, 4, p. 811-23 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedCombination of genetics and spatial modelling highlights the sensitivity of cod (Gadus morhua) population diversity in the North Sea to distributions of fishing
Carvalho, G. R., Heath, M. R., Culling, M. A., Crozier, W. W., Fox, C. J., Gurney, W. S., Hutchinson, W. F., Nielsen, E. E., O'Sullivan, M., Preedy, K. F., Righton, D. A., Speirs, D. C., Taylor, M. I. & Wright, P. J., 17 Nov 2013, In: ICES Journal of Marine Science. 71, 4, p. 794-807
Research output: Contribution to journal › Article › peer-review
- PublishedComplex cocktails: the evolutionary novelty of venoms
Wuster, W., Casewell, N. R., Wüster, W., Vonk, F. J., Harrison, R. A. & Fry, B. G., 1 Apr 2013, In: Trends in Ecology and Evolution. 28, 4, p. 291-229
Research output: Contribution to journal › Article › peer-review
- PublishedConvergent evolution of floral signals underlies the success of Neotropical orchids
Papadopulos, A. S. T., Powell, M. P., Pupulin, F., Warner, J., Hawkins, J. A., Salamin, N., Chittka, L., Williams, N. H., Whitten, W. M., Loader, D., Valente, L. M., Chase, M. W. & Savolainen, V., 22 Aug 2013, In: Proceedings of the Royal Society B: Biological Sciences. 280, 1765, p. 20130960
Research output: Contribution to journal › Article › peer-review
- PublishedEvaluation of spatial contamination patterns for norovirus and faecal indicator bacteria near to a coastal sewage discharge using Mytilus edulis as biosentinels
Winterbourn, J. B., Clements, K., Malham, S., McDonald, J. & Jones, D. L., Jan 2013, 92 McLeod et al (eds.). Proc. 9th Int. Conf. Molluscan Shellfish Safety . p. 89-92
Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
- PublishedExperimental harvesting of fish populations drives genetically based shifts in body size and maturation
Van Wijk, S. J., van Wijk, S. J., Taylor, M. I., Creer, S., Dreyer, C., Rodrigues, F. M., Ramnarine, I. W., van Oosterhout, C. & Carvalho, G. R., 1 May 2013, In: Frontiers in Ecology and the Environment. 11, 4, p. 181–187
Research output: Contribution to journal › Article › peer-review
- PublishedInbred and furious: negative association between aggression and genetic diversity in highly inbred fish
Ellison, A., Garcia de Leaniz, C. & Consuegra, S., Apr 2013, In: Molecular Ecology. 22, 8, p. 2292-2300
Research output: Contribution to journal › Article › peer-review
- PublishedInvestigating the molecular systematic relationships amongst selected Plesionika (Decapoda: Pandalidae) from the Northeast Atlantic and Mediterranean Sea
da Silva, J. M., dos Santos, A., Cunha, M. R., Costa, F. O., Creer, S. & Carvalho, G. R., 1 Jun 2013, In: Marine Ecology. 34, 2, p. 157-170
Research output: Contribution to journal › Article › peer-review
- PublishedMismatch between molecular (mtDNA) and morphological classification of Macrobrachium prawns from Southern Nigeria: Cryptic freshwater species and brackish water morphotypes
Jimoh, A. A., Anetekhai, M. A., Cummings, S., Abanikanda, O. T., Turner, G. F., van Oosterhout, C. & Hanfling, B., 1 Oct 2013, In: Aquaculture. 410-411, p. 25-31
Research output: Contribution to journal › Article › peer-review
- PublishedNile tilapia invades the Lake Malawi catchment
Shechonge, A. H., Genner, M. J., Connell, E., Shechonge, A., Smith, A., Swanstrom, J., Mzighani, A., Ngatunga, B. P. & Turner, G. F., 12 Nov 2013, In: African Journal of Aquatic Science. 38, Supplement 1
Research output: Contribution to journal › Article › peer-review
- PublishedOn the biogeography of Centipeda: A species-tree diffusion approach
Nylinder, S., Lemey, P., De Bruyn, M., Suchard, M. A., Pfeil, B., Walsh, N. & Anderberg, A. A., 12 Dec 2013, In: Systematic Biology. 63, 2, p. 178-191
Research output: Contribution to journal › Article › peer-review
- PublishedOutlier SNP markers reveal fine-scale genetic structuring across European hake populations (Merluccius merluccius)
Milano, I., Babbucci, M., Cariani, A., Atanassova, M., Bekkevold, D., Carvalho, G., Espineira, M., Fiorentino, F., Garofalo, G., Geffen, A., Hansen, J. H., Helyar, S. J., Nielsen, E. E., Ogden, R., Patarnello, T., Stagioni, M., Tinti, F. & Bargelloni, L., 18 Nov 2013, In: Molecular Ecology. 23, 1, p. 118-135
Research output: Contribution to journal › Article › peer-review
- PublishedPaleo-Drainage Basin Connectivity Predicts Evolutionary Relationships across Three Southeast Asian Biodiversity Hotspots
De Bruyn, M., de Bruyn, M., Rüber, L., Nylinder, S., Stelbrink, B., Lovejoy, N. R., Lavoué, S., Tan, H. H., Nugroho, E., Wowor, D., Ng, P. K., Azizah, M. N., Von Rintelen, T., Hall, R. & Carvalho, G. R., 1 May 2013, In: Systematic Biology. 62, 3, p. 398-410
Research output: Contribution to journal › Article › peer-review
- PublishedPhylogeography of the widespread African puff adder (Bitis arietans) reveals multiple Pleistocene refugia in southern Africa
Barlow, A., Baker, K., Hendry, C. R., Peppin, L., Phelps, T., Tolley, K. A., Wüster, C. E. & Wuster, W., 1 Feb 2013, In: Molecular Ecology. 22, 4, p. 1134-1157
Research output: Contribution to journal › Article › peer-review
- PublishedPlant soil interactions alter carbon cycling in an upland grassland soil
Thomson, B., Ostle, NI., McNamara, N., Oakley, S., Whiteley, A., Bailey, M. & Griffiths, R., 10 Sept 2013, In: Frontiers in Microbiology. 4
Research output: Contribution to journal › Article › peer-review
- PublishedPopulation genetics provides new insights into biomarker prevalence in dab (Limanda limanda L.): a key marine biomonitoring species
Tysklind, N., Taylor, M. I., Lyons, B. P., Goodsir, F., McCarthy, I. D. & Carvalho, G. R., 1 Sept 2013, In: Evolutionary Applications. 6, 6, p. 891-909
Research output: Contribution to journal › Article › peer-review
- PublishedPredicting function from sequence in a large multifunctional toxin family
Malhotra, A., Creer, S., Harris, J. B., Stöcklin, R., Favereau, P. & Thorpe, R. S., 3 Jul 2013, In: Toxicon. 72, p. 113-125
Research output: Contribution to journal › Article › peer-review
- PublishedSNP Discovery in European Anchovy (Engraulis encrasicolus, L) by High-Throughput Transcriptome and Genome Sequencing
Montes, I., Conklin, D., Albania, A., Creer, S., Carvalho, G. R., Santos, M. & Estonba, A., 1 Aug 2013, In: PLoS ONE. 8, 8, p. e70051
Research output: Contribution to journal › Article › peer-review
- PublishedSignal and preference divergence among populations of the non-endemic basal Lake Malawi cichlid fish Astatotilapia calliptera (Perciformes: Cichlidae)
Tyers, A. M. & Turner, G. F., 1 Sept 2013, In: Biological Journal of the Linnean Society. 110, 1, p. 180-188
Research output: Contribution to journal › Article › peer-review
- PublishedSuggestions for a molecular biodiversity assessment of South East Asian freshwater invertebrates. Lessons from the megadiverse beetles (Coleoptera)
De Bruyn, M., Balke, M., Hendrich, L., Toussaint, E. F., Zhou, X., von Rintelen, T. & de Bruyn, M., 26 Aug 2013, In: Journal of Limnology. 72, 2, p. 61-68
Research output: Contribution to journal › Article › peer-review
- PublishedThe conservation status of the world’s reptiles
Böhm, M., Collen, B., Baillie, J. E., Bowles, P., Chanson, J., Cox, N., Hammerson, G., Hoffmann, M., Livingstone, S. R., Ram, M., Rhodin, A. G., Stuart, S. N., van Dijk, P. P., Young, B. E., Afuang, L. E., Aghasyan, A., García, A., Aguilar, C., Ajtic, R., Akarsu, F., Alencar, L. R., Allison, A., Ananjeva, N., Anderson, S., Andrén, C., Ariano-Sánchez, D., Arredondo, J. C., Auliya, M., Austin, C. C., Avci, A., Baker, P. J., Barreto-Lima, A. F., Barrio-Amorós, C. L., Basu, D., Bates, M. F., Batistella, A., Bauer, A., Bennett, D., Böhme, W., Broadley, D., Brown, R., Burgess, J., Captain, A., Carreira, S., del Rosario Castañeda, M., Castro, F., Catenazzi, A., Cedeño-Vázquez, J. R., Chapple, D. G., Cheylan, M., Cisneros-Heredia, D. F., Cogalniceanu, D., Cogger, H., Corti, C., Costa, G. C., Couper, P. J., Courtney, T., Crnobrnja-Isailovic, J., Crochet, P. A., Crother, B., Cruz, F., Daltry, J. C., Daniels, R. J., Das, A., de Silva, A., Diesmos, A. C., Dirksen, L., Doan, T. M., Dodd Jr., C. K., Doody, J. S., Dorcas, M. E., de Barros Filho, J. D., Egan, V. T., El Mouden, E. H., Embert, D., Espinoza, R. E., Fallabrino, A., Feng, X., Feng, S. J., Fitzgerald, L., Flores-Villela, O., França, F. G., Frost, D., Gadsden, H., Gamble, T., Ganesh, S. R., Garcia, M. A., García-Pérez, J. E., Gatuscm, J., Gaulke, M., Geniez, P., Georges, A., Gerlach, J., Goldberg, S., Gonzale, J. C., Gower, D. J., Grant, T., Greenbaum, E., Grieco, C., Guo, P., Hamilton, A. M., Hare, K., Hedges, S. B., Heideman, N., Hilton-Taylor, C., Hitchmough, R., Hollingsworth, B., Hutchinson, M., Ineich, I., Iverson, J., Jaksic, F. M., Jenkins, R., Joger, U., Jose, R., Kaska, Y., Kaya, U., Keogh, J. S., Köhler, G., Kuchling, G., Kumlutaş, Y., Kwet, A., La Marca, E., Lamar, W., Lane, A., Lardner, B., Latta, C., Latta, G., Lau, M., Lavin, P., Lawson, D., LeBreton, M., Lehr, E., Limpus, D., Malhotra, A. & et al., N. V., 1 Jan 2013, In: Biological Conservation. 157, p. 372-385
Research output: Contribution to journal › Article › peer-review
- PublishedThe king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
Wuster, W., Vonk, F. J., Casewell, N. R., Henkel, C., Heimberg, A. M., Jansen, H. J., McCleary, R. J., Kerkkamp, H. M., Vos, R. A., Guerreiro, I., Calvete, J. J., Wüster, W., Woods, A. E., Logan, J. M., Harrison, R. A., Castoe, T. A., Jason de Koning, A. P., Pollock, D. D., Yandell, M., Calderon, D., Renjifo, C., Currier, R. B., Salgado, D., Pla, D., Sanz, L., Hyder, A. S., Ribeiro, J. M., Arntzen, J. W., van den Thillart, G. E., Boetzer, M., Pirovano, W., Dirks, R. P., Spaink, H. P., Duboule, D., McGlinn, E., Kini, R. M. & Richardson, M. K., 17 Dec 2013, In: Proceedings of the National Academy of Sciences of the United States. 110, 51, p. 20651-20656
Research output: Contribution to journal › Article › peer-review
- PublishedThe linking of plate tectonics and evolutionary divergence
De Bruyn, M., Phillips, M. J., Page, T. J., de Bruyn, M., Huey, J. A., Humphreys, W. F., Hughes, J. M., Santos, S. R., Schmidt, D. J. & Waters, J. M., 22 Jul 2013, In: Current Biology. 23, 14, p. R603-605
Research output: Contribution to journal › Article › peer-review
- PublishedTime and space in biogeography: response to Parenti & Ebach
De Bruyn, M., de Bruyn, M., Stelbrink, B., Page, T. J., Phillips, M. J., Lohman, D. J., Albrecht, C., Hall, R., von Rintelen, K., Ng, P. K., Shih, H. T., Carvalho, G. R. & von Rintelen, T., 1 Nov 2013, In: Journal of Biogeography. 40, 11, p. 2204-2206
Research output: Contribution to journal › Article › peer-review
- PublishedTranscriptomics and in vivo tests reveal novel mechanisms underlying endocrine disruption in an ecological sentinel, Nucella lapillus
Hughes, R. N., Pascoal, S., Carvalho, G. R., Vasieva, O., Hughes, R., Cossins, A., Fang, Y., Ashelford, K., Olohan, L., Barroso, C., Mendo, S. & Creer, S., 1 Mar 2013, In: Molecular Ecology. 22, 6, p. 1589-1608
Research output: Contribution to journal › Article › peer-review
2012
- PublishedA Ranking System for Reference Libraries of DNA Barcodes: Application to Marine Fish Species from Portugal
Costa, F. O., Landi, M., Martins, R., Costa, M. A., Carneiro, M., Alves, M. J., Steinke, D. & Carvalho, G. R., 25 Apr 2012, In: PLoS ONE. 7, 4, p. e35858
Research output: Contribution to journal › Article › peer-review
- PublishedAncient Hybridization and Phenotypic Novelty within Lake Malawi’s Cichlid Fish Radiation
Genner, M. J. & Turner, G. F., 1 Jan 2012, In: Molecular Biology and Evolution. 29, 1, p. 195-206
Research output: Contribution to journal › Article › peer-review
- PublishedAnonymous nuclear markers for the African adders (Serpentes: Viperidae: Bitis)
De Bruyn, M., Wuster, W., Barlow, A. & Grail, W., 1 Dec 2012, In: Conservation Genetics Resources. 4, 4, p. 967-969
Research output: Contribution to journal › Article › peer-review
- PublishedCharacteristics and heritability analysis of head scales of the Hungarian meadow viper (Vipera ursinii rakosiensis, Mehely 1893)
Uveges, B., Halpern, B., Pechy, T., Posta, J. & Komlosi, I., 1 Jan 2012, In: Amphibia-Reptilia. 33, 3-4, p. 393-400
Research output: Contribution to journal › Article › peer-review
- PublishedCosmopolitanism of microbial eukaryotes in the global deep seas
Creer, S. & Sinniger, F., 1 Mar 2012, In: Molecular Ecology. 21, 5, p. 1033-1035
Research output: Contribution to journal › Article › peer-review
- PublishedDNA Barcoding Reveals Cryptic Diversity within Commercially Exploited Indo-Malay Carangidae (Teleosteii: Perciformes)
De Bruyn, M., Jaafar, T. N., Taylor, M. I., Nor, S. A., de Bruyn, M. & Carvalho, G. R., 29 Nov 2012, In: PLoS ONE. 7, 11, p. e49623
Research output: Contribution to journal › Article › peer-review
- PublishedDynamic evolution of venom proteins in squamate reptiles
Wuster, W., Casewell, N. R. & Wüster, W., 18 Sept 2012, In: Nature Communications. 3, p. Article number: 1066
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental diel variation, parasite loads, and local population structuring of a mixed‐mating mangrove fish
Ellison, A., Wright, P., Taylor, D. S., Cooper, C., Regan, K., Currie, S. & Consuegra, S., 19 Jun 2012, In: Ecology and Evolution. 2, 7
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental selection on transcriptome-derived SNPs in a high gene flow marine fish, the Atlantic herring (Clupea harengus)
De Bruyn, M., Limborg, M. T., Helyar, S. J., DeBruyn, M., Taylor, M. I., Nielson, E. E., Ogden, R., Carvalho, G. R. & Bekkevold, D., 1 Aug 2012, In: Molecular Ecology. 21, 15, p. 3686-3703
Research output: Contribution to journal › Article › peer-review
- PublishedEvaluation of the ISO Standard 11063 DNA Extraction Procedure for Assessing Soil Microbial Abundance and Community Structure
Plassart, P., Terrat, S., Thomson, B., Griffiths, R., Dequiedt, S., Lelievre, M., Regnier, T., Nowak, V., Mark, B., Lemanceau, P., Bispo, A., Chabbi, A., Maron, P-A., Mougel, C. & Ranjard, L., 11 Sept 2012, In: PLoS ONE. 7, 9, p. 1-8 8 p.
Research output: Contribution to journal › Article › peer-review
- PublishedExtensive local-scale gene flow and long-term population stability in the intertidal mollusc Katharina tunicata (Mollusca: Polyplacophora)
Doonan, J., Beatty, G. E., Sigwart, J. D. & Provan, J., 2012, In: Biological Journal of the Linnean Society. 106, 3, p. 589-597 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedGene-associated markers provide tools for tackling illegal fishing and false eco-certification
Taylor, M. I., Nielsen, E. E., Cariani, A., Aoidh, E. M., Maes, G. E., Milano, I., Ogden, R., Taylor, M., Hemmer-Hansen, J., Babbucci, M., Bargelloni, L., Bekkevold, D., Diopere, E., Grenfell, L., Helyar, S., Limborg, M. T., Martinsohn, J. T., McEwing, R., Panitz, F., Patarnello, T., Tinti, F., Van Houdt, J. K., Volckaert, F. A., Waples, R. S., FishPopTrace consortium, N. V. & Carvalho, G. R., 22 May 2012, In: Nature Communications. 3, p. Article No. 851
Research output: Contribution to journal › Article › peer-review
- PublishedImportance of Micromonospora spp. as colonizers of cellulose in freshwater lakes as demonstrated by quantitative reverse transcriptase PCR of 16S rRNA
de Menezes, A. B., McDonald, J. E., Allison, H. E. & McCarthy, A. J., May 2012, In: Applied and Environmental Microbiology. 78, 9, p. 3495-9 5 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMaintaining functional major histocompatibility complex diversity under inbreeding: the case of a selfing vertebrate
Ellison, A., Allainguillaume, J., Girdwood, S., Pachebat, J., Peat, K. M., Wright, P. & Consuegra, S., 17 Oct 2012, In: Proceedings of the Royal Society B: Biological Sciences. 279, 1749, p. 5004-5013
Research output: Contribution to journal › Article › peer-review
- PublishedMetagenomic approaches to the discovery of cellulases
Rooks, D. J., McDonald, J. E. & McCarthy, A. J., 2012, In: Methods in Enzymology. 510, p. 375-94 20 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMethods for the isolation of cellulose-degrading microorganisms
McDonald, J. E., Rooks, D. J. & McCarthy, A. J., 2012, In: Methods in Enzymology. 510, p. 349-74 26 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMolecular biogeography and phylogeography of the freshwater fauna of the Indo-Australian Archipelago
De Bruyn, M., de Bruyn, M., von Rintelen, K., von Rintelen, T., Mather, P. B. & Carvalho, G. R., 1 Jul 2012, Biotic Evolution and Environmental Change in Southeast Asia. 2012 ed. Cambridge University Press
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedNovel defensive behaviours of both sexes of Vipera ursinii graeca (Serpentes: Viperidae)
Mizsei, E. & Uveges, B., 1 Oct 2012, In: Herpetology Notes. 5, p. 481-483 3 p.
Research output: Contribution to journal › Article › peer-review
- PublishedPhysical and behavioural influences on larval fish retention: contrasting patterns in two Antarctic fishes
Young, E. F., Rock, J., Meredith, M. P., Belchier, M., Murphy, E. J. & Carvalho, G. R., 28 Sept 2012, In: Marine Ecology Progress Series. 465, p. 201-215
Research output: Contribution to journal › Article › peer-review
- PublishedPlastic and Heritable Components of Phenotypic Variation in Nucella lapillus: An Assessment Using Reciprocal Transplant and Common Garden Experiments
Hughes, R. N., Pascoal, S., Carvalho, G. R., Creer, S., Rock, J., Kawaii, K., Mendo, S. & Hughes, R., 27 Jan 2012, In: PLoS ONE. 7, 1, p. e30289
Research output: Contribution to journal › Article › peer-review
- PublishedSNP Discovery Using Next Generation Transcriptomic Sequencing in Atlantic Herring (Clupea harengus)
Helyar, S. J., Limborg, M. T., Bekkevold, D., Babbucci, M., van Houdt, J., Maws, G. E., Bargelloni, L., Nielsen, R. O., Taylor, M. I., Ogden, R., Cariani, A., Carvalho, G. R., FishPopTrace Consortium, N. V. & Panitz, F., 7 Aug 2012, In: PLoS ONE. 7, 8, p. e42089
Research output: Contribution to journal › Article › peer-review
- PublishedSample richness and genetic diversity as drivers of chimera formation in nSSU metagenetic analyses
Fonseca, V. G., Nichols, B., Lallias, D., Quince, C., Carvalho, G. R., Power, D. M. & Creer, S., 25 Jan 2012, In: Nucleic Acids Research. 40, 9, p. e66
Research output: Contribution to journal › Article › peer-review
- PublishedSequencing our way towards understanding global eukaryotic biodiversity
Bik, H. M., Porazinska, D., Creer, S., Caporaso, J. G., Knight, R. & Thomas, W. K., 1 Apr 2012, In: Trends in Ecology and Evolution. 27, 4, p. 233-243
Research output: Contribution to journal › Article › peer-review
- PublishedSpecies, sex, size and male maturity composition of previously unreported elasmobranch landings in Kuwait, Qatar and Abu Dhabi Emirate
Moore, A. B., McCarthy, I. D., Carvalho, G. R. & Pierce, R., 1 Apr 2012, In: Journal of Fish Biology. 80, 5, p. 1619-1642
Research output: Contribution to journal › Article › peer-review
- PublishedThe Evolution of Large Testes: Sperm Competition or Male Mating Rate?
Vahed, K. & Parker, D. J., 1 Feb 2012, In: Ethology. 118, 2, p. 107-117
Research output: Contribution to journal › Review article › peer-review
- PublishedThe Fibrobacteres: an Important Phylum of Cellulose-Degrading Bacteria
Ransom-Jones, E., Jones, D., McCarthy, A. J. & McDonald, J. E., Feb 2012, In: Microbial Ecology. 63, 2, p. 267-281
Research output: Contribution to journal › Article › peer-review
- PublishedThe microbial ecology of anaerobic cellulose degradation in municipal waste landfill sites: evidence of a role for fibrobacters
McDonald, J. E., Houghton, J. N., Rooks, D. J., Allison, H. E. & McCarthy, A. J., 1 Apr 2012, In: Environmental Microbiology. 14, 4, p. 1077-1087
Research output: Contribution to journal › Article › peer-review
- PublishedThe prediction of adaptive evolution: empirical application of the secondary theorem of selection and comparison to the breeder's equation
Morrissey, M. B., Parker, D. J., Korsten, P., Pemberton, J. M., Kruuk, L. E. B. & Wilson, A. J., 1 Aug 2012, In: Evolution. 66, 8, p. 2399-410 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe structural and functional diversification of the Toxicofera reptile venom system
Wuster, W., Fry, B. G., Casewell, N. R., Wüster, W., Vidal, N., Young, B. & Jackson, T. N., 15 Sept 2012, In: Toxicon. 60, 4, p. 434-448
Research output: Contribution to journal › Article › peer-review
- PublishedVenom lethality and diet: Differential responses of natural prey and model organisms to the venom of the saw-scaled vipers (Echis)
Richards, D. P., Barlow, A. & Wüster, W., 1 Jan 2012, In: Toxicon. 59, p. 110-116 7 p.
Research output: Contribution to journal › Article › peer-review
2011
- PublishedAnonymous nuclear markers for halfbeak fishes of the genus Hemirhamphodon
De Bruyn, M., Carvalho, G. R., de Bruyn, M. & Grail, W. C., 1 Jan 2011, In: Conservation Genetics Resources. 3, 1, p. 155-157
Research output: Contribution to journal › Article › peer-review
- PublishedAnonymous nuclear markers for the Blue Panchax killifish (Aplocheilus panchax)
De Bruyn, M., de Bruyn, M., Grail, W. & Carvalho, G. R., 1 Jan 2011, In: Conservation Genetics Resources. 3, 1, p. 53-55
Research output: Contribution to journal › Article › peer-review
- PublishedApplication of SNPs for population genetics of nonmodel organisms: new opportunities and challenges
Helyar, S., Hemmer-Hansen, J., Bekkevold, D., Taylor, M. I., Ogden, R., Limborg, M. T., Cariani, A., Maes, G. E., Diopere, E., Carvalho, G. & Nielsen, A., Mar 2011, In: Molecular Ecology Resources. 11, S1, p. 123-136
Research output: Contribution to journal › Article › peer-review
- PublishedBest of both worlds? Association between outcrossing and parasite loads in a selfing fish
Ellison, A., Cable, J. & Consuegra, S., Oct 2011, In: Evolution. 65, 10, p. 3021-3026
Research output: Contribution to journal › Article › peer-review
- PublishedBiogeography of the Indo-Australian Archipelago
De Bruyn, M., Carvalho, G. R., Lohman, D. J., de Bruyn, M., Page, T., von Rintelen, K., Hall, R., Ng, P. K., Shih, H. T. & von Rintelen, T., 1 Dec 2011, In: Annual Review of Ecology, Evolution, and Systematics. 42, p. 205-226
Research output: Contribution to journal › Article › peer-review
- PublishedCompetition and phylogeny determine community structure in Müllerian co-mimics
Alexandrou, M. A., Oliveira, C., Maillard, M., McGill, R. A., Newton, J., Creer, S. & Taylor, M. I., 1 Jun 2011, In: Nature. 469, p. 84-88
Research output: Contribution to journal › Article › peer-review
- PublishedDetecting population structure in a high gene-flow species, Atlantic herring (Clupea harengus): direct, simultaneous evaluation of neutral vs putatively selected loci.
Andre, C., Larsson, L. C., Laikre, L., Bekkevold, D., Brigham, J., Carvalho, G. R., Dahlgren, T. G., Hutchinson, W. F., Mariani, S., Mudde, K., Ruzzante, D. E. & Ryman, N., 1 Feb 2011, In: Heredity. 106, 2, p. 270-280
Research output: Contribution to journal › Article › peer-review
- PublishedDomain loss facilitates accelerated evolution and neofunctionalization of duplicate snake venom metalloproteinase toxin genes.
Wuster, W., Casewell, N. R., Wagstaff, S. C., Harrison, R. A., Renjifo, C. & Wüster, W., 1 Sept 2011, In: Molecular Biology and Evolution. 28, 9, p. 2637-2649
Research output: Contribution to journal › Article › peer-review
- PublishedEnding the drought: new strategies for improving the flow of affordable, effective antivenoms in Asia and Africa
Williams, D. J., Gutiérrez, J. M., Calvete, J. J., Wüster, W., Ratanabanangkoon, K., Paiva, O., Brown, N. I., Casewell, N. R., Harrison, R. A., Rowley, P., O'Shea, M., Jensen, S. D. & Winkel, K. D., 24 Aug 2011, In: Journal of Proteomics. 74, 9, p. 1735–1767 33 p.
Research output: Contribution to journal › Article › peer-review
- PublishedFaunal histories from Holocene ancient DNA
De Bruyn, M., de Bruyn, M., Hoelzel, A. R., Carvalho, G. R. & Hofreiter, M., 1 Aug 2011, In: Trends in Ecology and Evolution. 26, 8, p. 405-413
Research output: Contribution to journal › Article › peer-review
- PublishedGene tree parsimony of multilocus snake venom protein families reveals species tree conflict as a result of multiple parallel gene loss.
Wuster, W., Casewell, N. R., Wagstaff, S. C., Harrison, R. A. & Wüster, W., 1 Mar 2011, In: Molecular Biology and Evolution. 28, 3, p. 1157-1172
Research output: Contribution to journal › Article › peer-review
- PublishedLarger testes are associated with a higher level of polyandry, but a smaller ejaculate volume, across bushcricket species (Tettigoniidae)
Vahed, K., Parker, D. J. & Gilbert, J. D. J., 23 Apr 2011, In: Biology letters. 7, 2, p. 261-4 4 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMolecular phylogeography of Jerdon’s pitviper (Protobothrops jerdonii): importance of the uplift of the Tibetan plateau
Guo, P., Liu, Q., Li, C., Chen, X., Jiang, K., Wang, Y. Z. & Malhotra, A., 1 Dec 2011, In: Journal of Biogeography. 38, 12, p. 2326–2336
Research output: Contribution to journal › Article › peer-review
- PublishedNiche specialization of terrestrial archaeal ammonia oxidizers
Gubry-Rangin, C., Hai, B., Quince, C., Engel, M., Thomson, B. C., James, P., Schloter, M., Griffiths, R. I., Prosser, J. I. & Nicol, G. W., 8 Dec 2011, In: Proceedings of the National Academy of Sciences. 108, 52, p. 21206-21211 6 p.
Research output: Contribution to journal › Article › peer-review
- PublishedNovel Tools for Conservation Genomics: Comparing Two High-Throughput Approaches for SNP Discovery in the Transcriptome of the European Hake
Milano, I., Babbucci, M., Panitz, F., Ogden, R., Nielsen, R. O., Taylor, M. I., Helyar, S. J., Carvalho, G. R., Espiñeira, M., Atanassova, M., Tinti, F., Mae, G. E., Patarnello, T. & Bargelloni, L., 22 Nov 2011, In: PLoS ONE. 6, 11, p. e28008
Research output: Contribution to journal › Article › peer-review
- PublishedPhylogenetic structure and species boundaries in the mountain pitviper Ovophis monticola (Serpentes: Viperidae: Crotalinae) in Asia.
Malhotra, A., Dawson, K., Guo, P. & Thorpe, R. S., 1 May 2011, In: Molecular Phylogenetics and Evolution. 59, 2, p. 444-457
Research output: Contribution to journal › Article › peer-review
- PublishedRepeated colonization and hybridization in Lake Malawi cichlids.
Joyce, D. A., Lunt, D. H., Genner, M. J., Turner, G. F., Bills, R. & Seehausen, O., 8 Feb 2011, In: Current Biology. 21, 3, p. R108-R109
Research output: Contribution to journal › Article › peer-review
- PublishedSpeciation with gene flow on Lord Howe Island
Papadopulos, A. S. T., Baker, W. J., Crayn, D., Butlin, R. K., Kynast, R. G., Hutton, I. & Savolainen, V., 9 Aug 2011, In: Proceedings of the National Academy of Sciences of the United States of America. 108, 32, p. 13188-93 6 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSuccessful extraction of DNA from archived alcohol-fixed white-eye fish specimens using an ancient DNA protocol
De Bruyn, M., DeBruyn, M., Parenti, L. R. & Carvalho, G. R., 1 Jun 2011, In: Journal of Fish Biology. 78, 7, p. 2074-2079
Research output: Contribution to journal › Article › peer-review
- PublishedTemporal genetic homogeneity among shore crab (Carcinus maenas) larval events supplied to an estuarine system on the Portuguese northwest coast.
Domingues, C. P., Creer, S., Taylor, M. I., Queiroga, H. & Carvalho, G. R., 1 May 2011, In: Heredity. 106, 5, p. 832-840
Research output: Contribution to journal › Article › peer-review
- PublishedThe bacterial biogeography of British soils
Griffiths, R. I., Thomson, B. C., James, P., Bell, T., Bailey, M. & Whiteley, A. S., 20 Apr 2011, In: Environmental Microbiology. 13, 6, p. 1642-1654 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe diversity of cyanomyovirus populations along a North-South Atlantic Ocean transect
Jameson, E., Mann, N. H., Joint, I., Sambles, C. & Mühling, M., 1 Nov 2011, In: The ISME Journal. 5, 11, p. 1713-21 9 p.
Research output: Contribution to journal › Article › peer-review
2010
- Published454-pyrosequencing: a molecular battiscope for freshwater viral ecology
Rooks, D. J., Smith, D. L., McDonald, J. E., Woodward, M. J., McCarthy, A. J. & Allison, H. E., 21 Jul 2010, In: Genes. 1, 2, p. 210-26 17 p.
Research output: Contribution to journal › Article › peer-review
- PublishedAnonymous nuclear markers for SouthEast Asian halfbeak fishes (Dermogenys)
De Bruyn, M., Grail, W., Barlow, A. & Carvalho, G. R., 1 Sept 2010, In: Conservation Genetics Resources. 2, 1, p. 325-327
Research output: Contribution to journal › Article › peer-review
- PublishedClosely related protist strains have different grazing impacts on natural bacterial communities
Glücksman, E., Bell, T., Griffiths, R. I. & Bass, D., 3 Dec 2010, In: Environmental Microbiology. 12, 12, p. 3105-3113 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedColonization history and genetic diversity: adaptive potential in early stage invasions.
Eales, J. F., Thorpe, R. S. & Malhotra, A., 1 Jul 2010, In: Molecular Ecology. 19, 14, p. 2858-2869
Research output: Contribution to journal › Article › peer-review
- PublishedComposition of the landfill microbial community as determined by application of domian- and group-specific 16s and 18s rRNA-targeted oligonucleotide probes.
McDonald, J. E., Allison, H. E. & McCarthy, A. J., 1 Feb 2010, In: Applied and Environmental Microbiology. 76, 4, p. 1301-1306
Research output: Contribution to journal › Article › peer-review
- PublishedDetailed analysis of the microdiversity of Prochlorococcus populations along a north-south Atlantic ocean transect
Jameson, E., Joint, I., Mann, N. H. & Mühling, M., 1 Jan 2010, In: Environmental Microbiology. 12, 1, p. 156-71 16 p.
Research output: Contribution to journal › Article › peer-review
- PublishedDevelopment and validation of a qPCR-based method for quantifying Shiga toxin-encoding and other lambdoid bacteriophages.
Rooks, D. J., Yan, Y., McDonald, J. E., Woodward, M. J., McCarthy, A. J. & Allison, H. E., 1 May 2010, In: Environmental Microbiology. 12, 5, p. 1194-1204
Research output: Contribution to journal › Article › peer-review
- PublishedEffects of sieving, drying and rewetting upon soil bacterial community structure and respiration rates
Thomson, B. C., Ostle, N. J., McNamara, N. P., Whiteley, A. S. & Griffiths, R. I., Oct 2010, In: Journal of Microbiological Methods. 83, 1, p. 69-73 5 p.
Research output: Contribution to journal › Article › peer-review
- PublishedEstablishment and expansion of Lake Malawi rock fish populations after a dramatic Late Pleistocene lake level rise.
Genner, M. J., Knight, M. E., Haeslers, M. P. & Turner, G. F., 1 Jan 2010, In: Molecular Ecology. 19, 1, p. 170-182
Research output: Contribution to journal › Article › peer-review
- PublishedEstimating genetic variability in non-model taxa: a general procedure for discriminating sequence errors from actual variation.
Dawson, K., Thorpe, R. S. & Malhotra, A., 6 Dec 2010, In: PLoS ONE. 15, 12, p. e15204
Research output: Contribution to journal › Article › peer-review
- PublishedField scale molecular analysis for the monitoring of bacterial community structures during on-site diesel bioremediation
Ciric, L., Griffiths, R. I., Philp, J. C. & Whiteley, A. S., Jul 2010, In: Bioresource technology . 101, 14, p. 5235-5241 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedGenetic structure of Carcinus maenas within its native range: larval dispersal and oceanographic variability.
Domingues, C. P., Creer, S., Taylor, M. I., Queiroga, H. & Carvalho, G. R., 14 Jul 2010, In: Marine Ecology Progress Series. 410, p. 111-123
Research output: Contribution to journal › Article › peer-review
- PublishedHigh-Throughput Method for Rapid Induction of Prophages from Lysogens and Its Application in the Study of Shiga Toxin-Encoding Escherichia coli Strains
McDonald, J. E., Smith, D. L., Fogg, P. C., McCarthy, A. J. & Allison, H. E., 1 Apr 2010, In: Applied and Environmental Microbiology. 76, 7, p. 2360-2365
Research output: Contribution to journal › Article › peer-review
- PublishedHigh-resolution modelling of the shelf and open ocean adjacent to South Georgia, Southern Ocean
Young, E. F., Meredith, M. P., Murphy, E. J. & Carvalho, G. R., 16 Dec 2010, In: Deep Sea Research II: Topical Studies in Oceanography.
Research output: Contribution to journal › Article › peer-review
- PublishedIdentification of carbohydrate metabolism genes in the metagenome of a marine biofilm community shown to be dominated by gammaproteobacteria and bacteroidetes
Edwards, J. L., Smith, D. L., Connolly, J., McDonald, J. E., Cox, M. J., Joint, I., Edwards, C. & McCarthy, A. J., 26 Oct 2010, In: Genes. 1, 3, p. 371-84 14 p.
Research output: Contribution to journal › Article › peer-review
- PublishedInclusion of nuclear intron sequence data helps to identify the Asian sister group of New World pitvipers.
Malhotra, A., Creer, S., Pook, C. E. & Thorpe, R. S., 1 Jan 2010, In: Molecular Phylogenetics and Evolution. 54, 1, p. 172-178
Research output: Contribution to journal › Article › peer-review
- PublishedLake of flies, or lake of fish? A trophic model of Lake Malawi.
Darwall, W. R., Allison, E. H., Turner, G. F. & Irvine, K., 1 Feb 2010, In: Ecological Modelling. 221, 4, p. 713-727
Research output: Contribution to journal › Article › peer-review
- PublishedMolecular sexing of African rhinoceros.
Peppin, L., McEwing, R., Ogden, R., Hermes, R., Harper, C., Guthrie, A. & Carvalho, G. R., 1 Jun 2010, In: Conservation Genetics. 11, 3, p. 1181-1184
Research output: Contribution to journal › Article › peer-review
- PublishedPopulation structure on breeding grounds of Lake Malawi's 'twilight zone' cichlid fishes.
Genner, M. J., Nichols, P., Shaw, P. W., Carvalho, G. R., Robinson, R. L. & Turner, G. F., 1 Feb 2010, In: Journal of Biogeography. 37, 2, p. 258-269
Research output: Contribution to journal › Article › peer-review
- PublishedPre-clinical assays predict pan-african Echis viper efficacy for a species-specific antivenom.
Wuster, W., Casewell, N. R., Cook, D. A., Wagstaff, S. C., Nasidi, A., Durfa, N., Wüster, W. & Harrison, R. A., 1 Oct 2010, In: PLoS Neglected Tropical Diseases. 4, 10, p. e851
Research output: Contribution to journal › Article › peer-review
- PublishedProtists have divergent effects on bacterial diversity along a productivity gradient
Bell, T., Bonsall, M. B., Buckling, A., Whiteley, A. S., Goodall, T. & Griffiths, R. I., 10 Mar 2010, In: Biology letters. 6, 5, p. 639-642 4 p.
Research output: Contribution to journal › Article › peer-review
- PublishedSecond-generation environmental sequencing unmasks marine metazoan biodiversity.
Fonseca, V. G., Carvalho, G. R., Sung, W., Johnson, H. F., Power, D. M., Neill, S. P., Packer, M., Blaxter, M. L., Lambshead, J. D., Thomas, W. K. & Creer, S., 19 Oct 2010, In: Nature Communications. 1, 7, p. 98
Research output: Contribution to journal › Article › peer-review
- PublishedSecond-generation sequencing derived insights into the temporal biodiversity dynamics of freshwater protists.
Creer, S., 1 Jul 2010, In: Molecular Ecology. 19, 14, p. 2829-2831
Research output: Contribution to journal › Article › peer-review
- PublishedSulfidogenesis and selective precipitation of metals at low pH mediated by Acidithiobacillus spp. and acidophilic sulfate-reducing bacteria
Jameson, E., Rowe, O. F., Hallberg, K. B. & Johnson, D. B., 1 Oct 2010, In: Hydrometallurgy. 104, 3-4, p. 488-493
Research output: Contribution to journal › Article › peer-review
- PublishedThe intensity of pre- and post-copulatory mate guarding in relation to spermatophore transfer in the cricket Gryllus bimaculatus
Parker, D. J. & Vahed, K., 1 May 2010, In: Journal of Ethology. 28, 2, p. 245-249
Research output: Contribution to journal › Article › peer-review
- PublishedThe uneven phylogeny and biogeography of Erodium (Geraniaceae): radiations in the Mediterranean and recent recurrent intercontinental colonization
Fiz-Palacios, O., Vargas, P., Vila, R., Papadopulos, A. S. T. & Aldasoro, J. J., Dec 2010, In: Annals of Botany. 106, 6, p. 871-84 14 p.
Research output: Contribution to journal › Article › peer-review
- PublishedUltrasequencing of the meiofaunal biosphere: practice, pitfalls and promises.
Creer, S., Fonseca, V. G., Porazinska, D. L., Giblin-Davis, R. M., Sung, W., Powers, D. M., Packer, M., Carvalho, G. R., Blaxter, M. L., Lambshead, P. J. & Thomas, W. K., 1 Mar 2010, In: Molecular Ecology. 19, 1, p. 4-20
Research output: Contribution to journal › Article › peer-review
- PublishedWhat's your poison?
Wuster, W. & Wüster, W., 1 Jun 2010, In: Heredity. 104, 6, p. 519
Research output: Contribution to journal › Article › peer-review
2009
- PublishedAn evaluation of the systematic value of skull morphology in the Trimeresurus radiation (Serpentes: Viperidae: Crotalinae) of Asian pitvipers.
Guo, P., Malhotra, A., Creer, S. & Pook, C. E., 1 Nov 2009, In: Journal of Zoological Systematics and Evolutionary Research. 47, 4, p. 378-384
Research output: Contribution to journal › Article › peer-review
- PublishedAssortative mating among Lake Malawi cichlid fish populations is not simply predictable from male nuptial colour.
Blais, J., Plenderleith, M., Rico, C., Taylor, M. I., Seehausen, O., Van Oosterhout, C. & Turner, G. F., 5 Mar 2009, In: BMC Evolutionary Biology. 9, p. 53
Research output: Contribution to journal › Article › peer-review
- PublishedCo-evolution of diet and prey-specific venom activity supports the role of selection in snake venom evolution.
Wuster, W., Barlow, A., Pook, C. E., Harrison, R. A. & Wüster, W., 1 Jul 2009, In: Proceedings of The Royal Society B - Biological Sciences. 276, 1666, p. 2443-2449
Research output: Contribution to journal › Article › peer-review
- PublishedCoevolution of diet and prey-specific venom activity supports the role of selection in snake venom evolution.
Barlow, A., Pook, C. E., Harrison, R. A. & Wüster, W., 7 Jul 2009, In: Proceedings of the Royal Society B: Biological Sciences.
Research output: Contribution to journal › Article › peer-review
- PublishedComments on the systematic status of specimens belonging to the genus Viridovipera (Serpentes: Viperidae: Crotalinae) from Sichuan and Yunnan provinces of southwestern China, with a redescription of V. yunnanensis.
Guo, P., Malhotra, A., Thorpe, R. S., Creer, S. & Pook, C. E., 1 Jul 2009, In: Herpetological Journal. 19, 3, p. 151-162
Research output: Contribution to journal › Article › peer-review
- PublishedComparative venom gland transcriptome surveys of the saw-scaled vipers (Viperidae: Echis) reveal substantial intra-family gene diversity and novel venom transcripts.
Wuster, W., Casewell, N. R., Harrison, R. A., Wüster, W. & Wagstaff, S. C., 30 Nov 2009, In: BMC Genomics. 10, p. 564
Research output: Contribution to journal › Article › peer-review
- PublishedDevelopment and Application of Microsatellites in Carcinus maenas: Genetic Differentiation between Northern and Central Portuguese Populations
Pascoal, S., Creer, S., Taylor, M. I., Queiroga, H., Carvalho, G. & Mendo, S., 30 Sept 2009, In: PLoS ONE. 4, 9, p. e7268
Research output: Contribution to journal › Article › peer-review
- PublishedDevelopment of 30 microsatellite markers for dab (Limanda limanda L.): a key UK marine biomonitoring species.
Tysklind, N., Taylor, M. I., Lyons, B. P., McCarthy, I. D. & Carvalho, G. R., 1 May 2009, In: Molecular Ecology Resources. 9, 3, p. 951-955
Research output: Contribution to journal › Article › peer-review
- PublishedDisentangling the effects of evolutionary, demographic, and environmental factors influencing genetic structure of natural populations: Atlantic herring as a case study.
Gaggiotti, O. E., Bekkevold, D., Jorgensen, H. B., Foll, M., Carvalho, G. R., Andre, C. & Ruzzante, D. E., 1 Nov 2009, In: Evolution. 63, 11, p. 2939-2951
Research output: Contribution to journal › Article › peer-review
- PublishedElevated mtDNA diversity in introduced populations of Cynotilapia afra (Gunther 1894) in Lake Malawi National Park is evidence for multiple source populations and hybridization.
Zidana, H., Turner, G. F., Van Oosterhout, C. & Hanfling, B., 1 Nov 2009, In: Molecular Ecology. 18, 21, p. 4380-4389
Research output: Contribution to journal › Article › peer-review
- PublishedGenomic signatures of local directional selection in a high gene flow marine organism; the Atlantic cod (Gadus morhua).
Nielsen, E. E., Hemmer-Hansen, J., Poulsen, N. A., Loeschcke, V., Moen, T., Johansen, T., Mittelholzer, C., Taranger, G. L., Ogden, R. & Carvalho, G. R., 1 Dec 2009, In: BMC Evolutionary Biology. 9, p. 276
Research output: Contribution to journal › Article › peer-review
- PublishedHow sympatric is speciation in the Howea palms of Lord Howe Island?
Babik, W., Butlin, R. K., Baker, W. J., Papadopulos, A. S. T., Boulesteix, M., Anstett, M-C., Lexer, C., Hutton, I. & Savolainen, V., Sept 2009, In: Molecular Ecology. 18, 17, p. 3629-38 10 p.
Research output: Contribution to journal › Article › peer-review
- PublishedIn praise of subgenera: taxonomic status of cobras of the genus Naja Laurenti (Serpentes: Elapidae).
Wuster, W., Wallach, V., Wüster, W. & Broadley, D. G., 21 Sept 2009, In: Zootaxa. 2236, p. 26-36
Research output: Contribution to journal › Article › peer-review
- PublishedIsolation and characterization of 28 new microsatellite markers for European flounder (Platichthys flesus L.)
Tysklind, N., Neuparth, T., Ashcroft, G. R., Taylor, M. I., Lyons, B. P., McCarthy, I. D. & Carvalho, G. R., 1 May 2009, In: Molecular Ecology Resources. 9, 3, p. 1065-1068
Research output: Contribution to journal › Article › peer-review
- PublishedLocal Adaptation of Bacteriophages to Their Bacterial Hosts in Soil
Vos, M., Birkett, P. J., Birch, E., Griffiths, R. I. & Buckling, A., 14 Aug 2009, In: Science. 325, 5942, p. 833 1 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMicrobial biodiversity and ecosystem functioning under controlled conditions and in the wild: Biodiversity, Ecosystem Functioning, and Human Wellbeing: An Ecological and Economic Perspective
Bell, T., Gessner, M. O., Griffiths, R. I., McLaren, J. R., Morin, P. J., van der Heijden, M., van der Putten, W. H., Naeem, S. (ed.), Bunker, D. E. (ed.), Hector, A. (ed.), Loreau, M. (ed.) & Perrings, C. (ed.), Jul 2009, Biodiversity, Ecosystem Functioning, and Human Wellbeing: An Ecological and Economic . Oxford University Press USA, p. 121-133
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedMolecular biological detection and quantification of novel Fibrobacter populations in freshwater lakes.
McDonald, J. E., De Menezes, A. B., Allison, H. E. & McCarthy, A. J., 1 Aug 2009, In: Applied and Environmental Microbiology. 75, 15, p. 5148-5152
Research output: Contribution to journal › Article › peer-review
- PublishedPatterns of genetic differentiation between two co-occuring demersal species: the red mullet (Mullus barbatus) and the striped red mullet (Mullus surmuletus).
Galarza, J. A., Turner, G. F., Macpherson, E. & Rico, C., 1 Sept 2009, In: Canadian Journal of Fisheries and Aquatic Sciences. 66, 9, p. 1478-1490
Research output: Contribution to journal › Article › peer-review
- PublishedPatterns of self compatibility, inbreeding depression, outcrossing, and sex allocation in a marine bryozoan suggest the predominating influence of sperm competition.
Hughes, R. N., Wright, P. J., Carvalho, G. R. & Hutchinson, W. F., 1 Nov 2009, In: Biological Journal of the Linnean Society. 98, 3, p. 519-531
Research output: Contribution to journal › Article › peer-review
- PublishedPhylogeography and systematic revision of the Egyptian cobra (Serpentes: Elapidae: Naja haje) species complex, with the description of a new species from West Africa.
Wuster, W., Trape, J. F., Chirio, L. & Wüster, W., 21 Sept 2009, In: Zootaxa. 2236, p. 1-25
Research output: Contribution to journal › Article › peer-review
- PublishedPre- and post-copulatory mate choice in Platygryllus primiformis: cryptic female choice and sexual conflict
Parker, D. J., 10 Apr 2009, In: Bioscience Horizons. p. 164-171
Research output: Contribution to journal › Article › peer-review
- PublishedRapid Response of a Marine Mammal Species to Holocene Climate and Habitat Change.
De Bruyn, M., Hall, B. L., Chauke, L. F., Baroni, C., Koch, P. L. & Hoelzel, A. R., 10 Jul 2009, In: PLOS Genetics. 5, 7, p. e1000554
Research output: Contribution to journal › Article › peer-review
- PublishedRecent advances in venomous snake systematics.
Wuster, W., Quijada-Mascarenas, J. A., Wüster, W. & Mackessy, S. P. (ed.), 1 Jan 2009, Handbook of Venoms and Toxins of Reptiles. 2009 ed. CRC Press, p. 25-64
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedSecondary contact during adaptive radiation: a community matrix for Lake Malawi cichlids.
Young, K. A., Whitman, J. M. & Turner, G. F., 1 Apr 2009, In: Journal of Evolutionary Biology. 22, 4, p. 882-889
Research output: Contribution to journal › Article › peer-review
- PublishedSulfidogenesis at low pH by acidophilic bacteria and its potential for the selective recovery of transition metals from mine waters
Johnson, D. B., Jameson, E., Rowe, O. F., Wakeman, K. & Hallberg, K. B., 24 Sept 2009, Biohydrometallurgy: a meeting point between microbial ecology,metal recovery processes and environmental remediation. Trans Tech Publications, Vol. 71-73. p. 693-696 (Advanced Materials Research).
Research output: Chapter in Book/Report/Conference proceeding › Chapter › peer-review
- PublishedSystematics of the Protobothrops jerdonii complex (Serpentes, Viperidae, Crotalinae) inferred from morphometric data and molecular phylogeny.
Guo, P., Malhotra, A., Li, C., Creer, S., Pook, P. E. & Wen, T., 1 Jul 2009, In: Herpetological Journal. 19, 2, p. 85-96
Research output: Contribution to journal › Article › peer-review
- PublishedThe influence of oceanographic fronts and early-life-history traits on connectivity among littoral fish species.
Galarza, J. A., Carreras-Carbonell, J., Macpherson, E., Pascual, M., Roques, S., Turner, G. F. & Rico, C., 3 Feb 2009, In: Proceedings of the National Academy of Sciences of the USA. 106, 5, p. 1473-1478
Research output: Contribution to journal › Article › peer-review
- PublishedVegetation Affects the Relative Abundances of Dominant Soil Bacterial Taxa and Soil Respiration Rates in an Upland Grassland Soil
Thomson, B. C., Ostle, N., McNamara, N., Bailey, M. J., Whiteley, A. S. & Griffiths, R. I., 25 Aug 2009, In: Microbial Ecology. 59, 2, p. 335-343 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedWhen continents collide: Phylogeny, historical biogeography and systematics of the medically important viper genus Echis (Squamata: Serpentes: Viperidae).
Wuster, W., Pook, C. E., Joger, U., Stumpel, N. & Wüster, W., 1 Dec 2009, In: Molecular Phylogenetics and Evolution. 53, 3, p. 792-807
Research output: Contribution to journal › Article › peer-review
2008
- PublishedA DNA-Based Approach for the Forensic Identification of Asiatic Black Bear (Ursus thibetanus) in a Traditional Asian Medicine.
Peppin, L., McEwing, R., Carvalho, G. R. & Ogden, R., 1 Nov 2008, In: Journal of Forensic Sciences. 53, 6, p. 1358-1362
Research output: Contribution to journal › Article › peer-review
- PublishedA nesting of vipers: Phylogeny and historical biogeography of the Viperidae (Squamata: Serpentes).
Wuster, W., Wüster, W., Peppin, L., Pook, C. E. & Walker, D. E., 1 Nov 2008, In: Molecular Phylogenetics and Evolution. 49, 2, p. 445-459
Research output: Contribution to journal › Article › peer-review
- PublishedAdaptive radiation in Lesser Antillean lizards: molecular phylogenetics and species recognition in the Lesser Antillean dwarf gecko complex, Sphaerodactylus fantasticus.
Thorpe, R. S., Jones, A. G., Malhotra, A. & Surget-Groba, Y., 1 Mar 2008, In: Molecular Ecology. 17, 6, p. 1489-1504
Research output: Contribution to journal › Article › peer-review
- PublishedAfrican cichlid Pseudotropheus spp. males moan to females during foreplay.
Simões, J. M., Fonseca, P. J., Turner, G. F. & Amorim, M. C., 1 Jun 2008, In: Journal of Fish Biology. 72, 10, p. 2689-2694
Research output: Contribution to journal › Article › peer-review
- PublishedApplication of a novel rpoC1-RFLP approach reveals that marine Prochlorococcus populations in the Atlantic gyres are composed of greater microdiversity than previously described
Jameson, E., Joint, I., Mann, N. H. & Mühling, M., 30 Jan 2008, In: Microbial Ecology. 55, 1, p. 141-51 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedCourtship and agonistic sounds by the cichlid fish Pseudotropheus zebra.
Simões, J. M., Duarte, I. G., Fonseca, P. J., Turner, G. F. & Amorim, M. C., 1 Aug 2008, In: Journal of the Acoustical Society of America. 124, 2, p. 1332-1338
Research output: Contribution to journal › Article › peer-review
- PublishedDNA barcodes of fish of the Scotia Sea, Antarctica indicate priority groups for taxonomic and systematics focus.
Rock, J., Costa, F. O., Walker, D. I., North, A. W., Hutchinson, W. F. & Carvalho, G. R., 1 Jun 2008, In: Antarctic Science. 20, 3, p. 253-262
Research output: Contribution to journal › Article › peer-review
- PublishedDetection of novel Fibrobacter populations in landfill sites and determination of their relative abundance via quantitative PCR.
McDonald, J. E., Lockhart, R. J., Cox, M. J., Allison, H. E. & McCarthy, A. J., 1 May 2008, In: Environmental Microbiology. 10, 5, p. 2360-2365
Research output: Contribution to journal › Article › peer-review
- PublishedEcological consequences of ingestion of Bacillus cereus on Bacillus thuringiensis infections and on the gut flora of a lepidopteran host
Raymond, B., Lijek, R. S., Griffiths, R. I. & Bonsall, M. B., Sept 2008, In: Journal of Invertebrate Pathology. 99, 1, p. 103-111 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedGenetic homogeneity among breeding grounds and nursery areas of an exploited Lake Malawi cichlid fish.
Genner, M. J., Nichols, P., Shaw, P. W., Carvalho, G. R., Robinson, R. L. & Turner, G. F., 1 Sept 2008, In: Freshwater Biology. 53, 9, p. 1823-1831
Research output: Contribution to journal › Article › peer-review
- PublishedGenetic markers in biomonitoring programmes: providing a population structure framework for data interpretation.
Tysklind, N., Lyons, B. P., Taylor, M. I., McCarthy, I. D. & Carvalho, G. R., 1 Jan 2008.
Research output: Contribution to conference › Paper
- PublishedMitochondrial DNA analysis reveals a new member of the Asian pitviper genus Viridovipera (Serpentes: Viperidae: Crotalinae).
Dawson, K., Malhotra, A., Thorpe, R. S., Guo, P., Mrinalini, N. V. & Ziegler, T., 1 Oct 2008, In: Molecular Phylogenetics and Evolution. 49, 1, p. 356-361
Research output: Contribution to journal › Article › peer-review
- PublishedMolecular phylogeny supports division of the 'cosmopolitan' taxon Celleporella (Bryozoa; Cheilostomata) into four major clades.
Hughes, R. N., Gomez, A., Wright, P. J., Moyano, H. I., Cancino, J. M., Carvalho, G. R. & Lunt, D. H., 1 Jan 2008, In: Molecular Phylogenetics and Evolution. 46, 1, p. 369-374
Research output: Contribution to journal › Article › peer-review
- PublishedOrigin of the eastern brownsnake, Pseudonaja textilis (Dumeril, Bibron and Dumeril) (Serpentes : Elapidae : Hydrophiinae) in New Guinea: evidence of multiple dispersals from Australia, and comments on the status of Pseudonaja textilis pughi Hoser 2003.
Wuster, W., Williams, D. J., O'Shea, M., Daguerre, R. L., Pook, C. E., Wüster, W., Hayden, C. J., McVay, J. D., Paiva, O., Matainaho, T., Winkel, K. D. & Austin, C. C., 1 Jan 2008, In: Zootaxa. 1703, p. 47-61
Research output: Contribution to journal › Article › peer-review
- PublishedParadigm shifts in marine fisheries genetics: ugly hypotheses slain by beautiful facts.
Hauser, L. & Carvalho, G. R., 1 Dec 2008, In: Fish and Fisheries. 9, 4, p. 333-362
Research output: Contribution to journal › Article › peer-review
- PublishedParallel life history evolution in mouthbrooding cichlids from the African Great Lakes.
Duponchelle, F., Paradis, E., Ribbink, A. J. & Turner, G. F., 7 Oct 2008, In: Proceedings of the National Academy of Sciences of the USA. 105, 40, p. 15475-15480
Research output: Contribution to journal › Article › peer-review
- PublishedPatterns of molecular diversity in wild stocks of the redclaw crayfish (Cherax quadricarinatus) from northern Australia and Papua New Guinea: impacts of Plio-Pleistocene landscape evolution
De Bruyn, M., Baker, N., de Bruyn, M. & Mathier, P. B., 1 Aug 2008, In: Freshwater Biology. 53, 8, p. 1592-1605
Research output: Contribution to journal › Article › peer-review
- PublishedSpecies differences in courtship acoustic signals among five Lake Malawi cichlid species (Pseudotropheus spp.).
Amorim, M. C., Simões, J. M., Fonseca, P. J. & Turner, G. F., 1 Apr 2008, In: Journal of Fish Biology. 72, 6, p. 1355-1368
Research output: Contribution to journal › Article › peer-review
- PublishedStrategies for using population genetic markers in the European sentinel flatfish species Dab (Limanda limanda)
Lyons, B. P., Tysklind, N., Stentiford, G. D., Feist, S. W., Taylor, M. I., McCarthy, I. D. & Carvalho, G. R., 1 Jul 2008, In: Marine Environmental Research. 66, 1, p. 179-180
Research output: Contribution to journal › Article › peer-review
- PublishedWeak founder effect signal in a recent introduction of Caribbean Anolis
Eales, J. F., Thorpe, R. & Malhotra, A., 5 Feb 2008, In: Molecular Ecology. 17, 6, p. 1416-1426
Research output: Contribution to journal › Article › peer-review
2007
- PublishedAdaptive radiation of cichlid fish.
Turner, G. F., 9 Oct 2007, In: Current Biology. 17, 19, p. R827-R831
Research output: Contribution to journal › Article › peer-review
- PublishedAge of cichlids: New dates for ancient lake fish radiations
Genner, M. J., Seehausen, O., Lunt, D. H., Joyce, D. A., Shaw, P. W., Carvalho, G. R. & Turner, G. F., 1 May 2007, In: Molecular Biology and Evolution. 24, 5, p. 1269-1282
Research output: Contribution to journal › Article › peer-review
- PublishedChoosing and using introns in molecular phylogenetics.
Creer, S., 1 Jan 2007, In: Evolutionary Bioinformatics. 3, p. 99-108
Research output: Contribution to journal › Article › peer-review
- PublishedComparative phylogenography of endemic cyprinids in the south-west Iberian Peninsula: evidence for a new ichthyogeographic area.
Mesquita, N., Cunha, C., Carvalho, G. R. & Coelho, M. M., 1 Aug 2007, In: Journal of Fish Biology. 71, Supplement A, p. 45-75
Research output: Contribution to journal › Article › peer-review
- PublishedConcordance of allozyme and microsatellite differentiation in a marine fish, but evidence of selection at a microsatellite locus.
Larsson, L. C., Laikre, L., Palm, S., Andre, C., Carvalho, G. R. & Ryman, N., 1 Mar 2007, In: Molecular Ecology. 16, 6, p. 1135-1147
Research output: Contribution to journal › Article › peer-review
- PublishedCross-amplification of 10 new isolated polymorphic microsatellite loci for red mullet (Mullus barbatus) in striped red mullet (Mullus surmuletus).
Galarza, J. A., Turner, G. F., Macpherson, E., Carreras-Carbonell, J. & Rico, C., 1 Mar 2007, In: Molecular Ecology Notes. 7, 2, p. 230-232
Research output: Contribution to journal › Article › peer-review
- PublishedEvolution of a cichlid fish in a Lake Malawi satellite lake.
Genner, M. J., Nichols, P., Carvalho, G. R., Robinson, R. L., Shaw, P. W., Smith, A. & Turner, G. F., 22 Sept 2007, In: Proceedings of The Royal Society B - Biological Sciences. 274, 1623, p. 2249-2257
Research output: Contribution to journal › Article › peer-review
- PublishedEvolutionary implications of pollutants on genetic variability of sentinel bioindicator flatfish
Tysklind, N., Neuparth, T., Lyons, B. P., Taylor, M. I., McCarthy, I. D. & Carvalho, G. R., 1 Jan 2007.
Research output: Contribution to conference › Paper
- PublishedGet an eyeful of this: a new species of giant spitting cobra from eastern and north-eastern Africa (Squamata : Serpentes : Elapidae : Naja)
Wuster, W., Wüster, W. & Broadley, D. G., 1 Jan 2007, In: Zootaxa. 1532, p. 51-68
Research output: Contribution to journal › Article › peer-review
- PublishedInsights into the fate of a 13C labelled phenol pulse for stable isotope probing (SIP) experiments
Manefield, M., Griffiths, R., McNamara, N. P., Sleep, D., Ostle, N. & Whiteley, A., May 2007, In: Journal of Microbiological Methods. 69, 2, p. 340-344 5 p.
Research output: Contribution to journal › Article › peer-review
- PublishedIsolation and characterization of nine polymorphic microsatellite markers in the two-banded sea bream (Diplodus vulgaris) and cross-species amplification in the white sea bream (Diplodus sargus) and the saddled bream (Oblada melanura).
Roques, S., Galarza, J. A., Macpherson, E., Turner, G. F. & Rico, C., 1 Jul 2007, In: Molecular Ecology Notes. 7, 4, p. 661-663
Research output: Contribution to journal › Article › peer-review
- PublishedMHC adaptice divergence between closely related and sympatric african cichlids.
Blais, J., Rico, C., Van Oosterhout, C., Cable, J., Turner, G. F. & Bernatchez, L., 15 Aug 2007, In: PLoS ONE. 2, 8, p. e734
Research output: Contribution to journal › Article › peer-review
- PublishedMating trials validate the use of DNA barcoding to reveal cryptic speciation of a marine bryozoan taxon.
Gomez, A., Wright, P. J., Lunt, D. H., Cancino, J. M., Carvalho, G. R. & Hughes, R. N., 22 Jan 2007, In: Proceedings of The Royal Society B - Biological Sciences. 274, 1607, p. 199-207
Research output: Contribution to journal › Article › peer-review
- PublishedMitochondrial DNA phylogeography and mating compatibility reveal marked genetic structuring and speciation in the NE Atlantic bryozoan Celleporella hyalina
Gomez, A., Hughes, R. N., Wright, P. J., Carvalho, G. R. & Lunt, D. H., 1 May 2007, In: Molecular Ecology. 16, 10, p. 2173-2188
Research output: Contribution to journal › Article › peer-review
- PublishedNew evidence on the phylogenetic position of the poorly known Asian pitviper Protobothrops kaulbacki (Serpentes : Viperidae : Crotalinae) with a redescription of the species and a revision of the genus Protobothrops.
Guo, P., Malhotra, A., Li, P. P., Pook, C. E. & Creer, S., 1 Oct 2007, In: Herpetological Journal. 17, 4, p. 237-246
Research output: Contribution to journal › Article › peer-review
- PublishedPhylogeographic patterns of trans-Amazonian vicariants and Amazonian biogeography: the Neotropical rattlesnake (Crotalus durissus complex) as an example.
Wuster, W., Quijada-Mascarenas, J. A., Ferguson, J. E., Pook, C. E., Da Graca Salomao, M., Thorpe, R. S. & Wüster, W., 1 Aug 2007, In: Journal of Biogeography. 34, 8, p. 1296-1312
Research output: Contribution to journal › Article › peer-review
- PublishedPolymorphic microsatellite loci for the cardinal fish (Apogon imberbis).
Galarza, J. A., Roques, S., Carreras-Carbonell, J., Macpherson, E., Turner, G. F. & Rico, C., 1 Sept 2007, In: Conservation Genetics. 8, 5, p. 1251-1253
Research output: Contribution to journal › Article › peer-review
- PublishedQuality of hatchery-reared juveniles for marine fisheries stock enhancement.
Le Vay, L., Carvalho, G., Quinitio, E. T., Lebata, J. H., Ut, V. N. & Fushimi, H., 22 Aug 2007, In: Aquaculture. 268, 1-4, p. 169-180
Research output: Contribution to journal › Article › peer-review
- PublishedRaman-FISH: combining stable-isotope Raman spectroscopy and fluorescence in situ hybridization for the single cell analysis of identity and function
Huang, W. E., Stoecker, K., Griffiths, R., Newbold, L., Daims, H., Whiteley, A. S. & Wagner, M., 15 Jun 2007, In: Environmental Microbiology. 9, 8, p. 1878-1889 12 p.
Research output: Contribution to journal › Article › peer-review
- PublishedReproductive isolation among deep-water cichlid fishes of Lake Malawi differing in monochromatic male breeding dress
Genner, M. J., Nichols, P., Carvalho, G. R., Robinson, R. L., Shaw, P. W. & Turner, G. F., 1 Feb 2007, In: Molecular Ecology. 16, 3, p. 651-662
Research output: Contribution to journal › Article › peer-review
- PublishedThe genetic architecture of male colour differences between a sympatric Lake Malawi cichlid species pair.
Barson, N. J., Knight, M. E. & Turner, G. F., 1 Jan 2007, In: Journal of Evolutionary Biology. 20, 1, p. 45-53
Research output: Contribution to journal › Article › peer-review
- PublishedThe phylogeny of cobras inferred from mitochondrial DNA sequences: Evolution of venom spitting and the phylogeography of the African spitting cobras (Serpentes : Elapidae : Naja nigricollia complex)
Wuster, W., Wüster, W., Crookes, S., Ineich, I., Mane, Y., Pook, C. E., Trape, J. F. & Broadley, D. G., 1 Nov 2007, In: Molecular Phylogenetics and Evolution. 45, 2, p. 437-453
Research output: Contribution to journal › Article › peer-review
- PublishedThe sensitivity of a forest soil microbial community to acute gamma-irradiation
McNamara, N. P., Griffiths, R. I., Tabouret, A., Beresford, N. A., Bailey, M. J. & Whiteley, A. S., Oct 2007, In: Applied Soil Ecology. 37, 1, p. 1-9 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedValidation of the barcoding gene COI for use in forensic genetic species identification
Dawnay, N., Ogden, R., McEwing, R., Carvalho, G. & Thorpe, R. S., 15 Nov 2007, In: Forensic Science International. 173, 1, p. 1-6
Research output: Contribution to journal › Article › peer-review
- PublishedYurii Petrovich Altukhov 1936-2006 - Obituary
Carvalho, G. R. & Thorpe, J., 1 Feb 2007, In: Journal of Fish Biology. 70, 2, p. 331-333
Research output: Contribution to journal › Article › peer-review
2006
- PublishedBiocomplexity in a highly migratory pelagic marine fish, Atlantic herring.
Ruzzante, D. E., Mariani, S., Bekkevold, D., Andre, C., Mosegaard, H., Clausen, L. A., Dahlgren, T. G., Hutchinson, W. F., Hatfield, E. M., Torstensen, E., Brigham, J., Simmonds, E. J., Laikre, L., Larsson, L. C., Stet, R. J., Ryman, N. & Carvalho, G. R., 22 Jun 2006, In: Proceedings of The Royal Society B - Biological Sciences. 273, 1593, p. 1459-1464
Research output: Contribution to journal › Article › peer-review
- PublishedColour forms of Amazonian cichlid fish represent reproductively isolated species.
Ready, J. S., Sampaio, I., Schneider, H., Vinson, C., Dos Santos, T. & Turner, G. F., 1 Jul 2006, In: Journal of Evolutionary Biology. 19, 4, p. 1139-1148
Research output: Contribution to journal › Article › peer-review
- PublishedCombining molecular, morphological and ecological data to infer species boundaries in a cryptic tropical pitviper.
Sanders, K. L., Malhotra, A. & Thorpe, R. S., 1 Mar 2006, In: Biological Journal of the Linnean Society. 87, 3, p. 343-364
Research output: Contribution to journal › Article › peer-review
- PublishedDetection of active bacterial populations in soil
Timms-Wilson, T. M., Griffiths, R., Whiteley, A. S. & Bailey, M. J., 2006, Modern Soil Microbiology. van Elsas, J. D., Trevors, J. T., Jansson, J. K. & Nannipieri, P. (eds.). 2nd ed. CRC Press
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedEvidence for a Mullerian mimetic radiation in Asian pitvipers
Sanders, K. L., Malhotra, A. & Thorpe, R., 7 May 2006, In: Proceedings of The Royal Society B - Biological Sciences. 273, 1590, p. 1135-1141
Research output: Contribution to journal › Article › peer-review
- PublishedEvolutionary implications of pollutants on genetic variability of sentinel bioindicator flatfish.
Tysklind, N., Lyons, B. P., Taylor, M. I., McCarthy, I. D. & Carvalho, G. R., 1 Jan 2006.
Research output: Contribution to conference › Paper
- PublishedHeterogeneous evolution of microsatellites revealed by reconstruction of recent mutation history in an invasive apomictic snail, Potamopyrgus antipodarum
Weetman, D., Hauser, L. & Carvalho, G. R., 1 May 2006, In: Genetica. 127, 1-3, p. 285-293
Research output: Contribution to journal › Article › peer-review
- PublishedIsolation and characterization of polymorphic microsatellite markers for peacock wrasse (Symphodus tinca).
Galarza, J. A., Carreras-Carbonell, J., Macpherson, E., Turner, G. F. & Rico, C., 1 Sept 2006, In: Molecular Ecology Notes. 6, 3, p. 747-749
Research output: Contribution to journal › Article › peer-review
- PublishedMechanisms of density dependence in stream fish: exploitation competition for food reduces growth of adult European bullheads (Cottus gobio).
Davey, A. J., Turner, G. F., Hawkins, S. J. & Doncaster, C. P., 1 Mar 2006, In: Canadian Journal of Fisheries and Aquatic Sciences. 63, 3, p. 597-606
Research output: Contribution to journal › Article › peer-review
- PublishedOptimal intron analyses in the Trimeresurus radiation of Asian pitvipers.
Creer, S., Pook, C. E., Malhotra, A. & Thorpe, R. S., 1 Feb 2006, In: Systematic Biology. 55, 1, p. 57-72
Research output: Contribution to journal › Article › peer-review
- PublishedRoles of CITES in protecting new species.
Wuster, W., Vonk, F. J. & Wüster, W., 18 Aug 2006, In: Science. 313, 5789, p. 915-916
Research output: Contribution to journal › Article › peer-review
- PublishedStable Isotope Probing: A Critique of Its Role in Linking Phylogeny and Function
Manefield, M., Griffiths, R., Bailey, M. J. & Whiteley, A. S., 2006, Nucleic Acids and Proteins in Soil. Nannipieri, P. & Smalla, K. (eds.). Springer, p. 205-216
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedThe functions and components of the Sourhope soil microbiota
Griffiths, R. I., Bailey, M. J., McNamara, N. P. & Whiteley, A. S., Sept 2006, In: Applied Soil Ecology. 33, 2, p. 114-126 13 p.
Research output: Contribution to journal › Article › peer-review
- PublishedThe good, the bad and the ugly: Australian snake taxonomists and a history of the taxanomy of Australia's venomous snakes.
Wuster, W., Williams, D., Wüster, W. & Fry, B. G., 1 Dec 2006, In: Toxicon. 48, 7, p. 919-930
Research output: Contribution to journal › Article › peer-review
- PublishedTranslocations of rocky habitat cichlid fishes to Nkhata Bay, Lake Malawi.
Genner, M. J., Botha, A. & Turner, G. F., 1 Aug 2006, In: Journal of Fish Biology. 69, 2, p. 622-628
Research output: Contribution to journal › Article › peer-review
2005
- PublishedA molecular approach to detect hybridisation between crucian carp (Carassius carassius) and non-indigenous carp species (Carassius spp. and Cyprinus carpio)
Hanfling, B., Bolton, P., Harley, M. & Carvalho, G. R., 1 Mar 2005, In: Freshwater Biology. 50, 3, p. 403-417
Research output: Contribution to journal › Article › peer-review
- PublishedAn extant cichlid fish radiation emerged in an extinct Pleistocene lake.
Joyce, D. A., Lunt, D. H., Bills, R., Turner, G. F., Katongo, C., Duftner, N., Sturmbauer, C. & Seehausen, O., 5 May 2005, In: Nature. 435, 7038, p. 90-95
Research output: Contribution to journal › Article › peer-review
- PublishedCommon garden and natural selection experiments support ecotypic differentiation in the Dominican anole (Anolis oculatus).
Thorpe, R. S., Reardon, J. T. & Malhotra, A., 1 Apr 2005, In: American Naturalist. 165, 4, p. 495-504
Research output: Contribution to journal › Article › peer-review
- PublishedEnvironmental correlates of population differentiation in Atlantic herring
Bekkevold, D., Aandre, C., Dahlgren, T. G., Clausen, L. A., Torstensen, E., Mosegaard, H., Carvalho, G. R., Christensen, T. B., Norlinder, E. & Ruzzante, D. E., 1 Dec 2005, In: Evolution. 59, 12, p. 2656-2668
Research output: Contribution to journal › Article › peer-review
- PublishedFemale preference for conspecific males based on olfactory cues in a Lake Malawi cichlid fish.
Plenderleith, M., Van Oosterhout, C., Robinson, R. L. & Turner, G. F., 22 Dec 2005, In: Biology Letters. 1, 4, p. 411-414
Research output: Contribution to journal › Article › peer-review
- PublishedFunctional and compositional comparison of two activated sludge communities remediating coking effluent
Manefield, M., Griffiths, R. I., Leigh, M. B., Fisher, R. & Whiteley, A. S., 25 Feb 2005, In: Environmental Microbiology. 7, 5, p. 715-722 8 p.
Research output: Contribution to journal › Article › peer-review
- PublishedMacro- and micro-geographic variation in pantophysin (Panl) allele frequencies in NE Atlantic cod Gadus morhua
Case, R. A., Hutchinson, W. F., Hauser, L., Van Oosterhout, C. & Carvalho, G. R., 11 Oct 2005, In: Marine Ecology Progress Series. 301, p. 267-278
Research output: Contribution to journal › Article › peer-review
- PublishedMorphological correlates of incipient arboreality and ornithophagy in island pitvipers, and the phylogenetic position of Bothrops insularis.
Wuster, W., Wüster, W., Duarte, M. R. & Da Graca Salomao, M., 1 May 2005, In: Journal of Zoology. 266, 1, p. 1-10
Research output: Contribution to journal › Article › peer-review
- PublishedNo rattlesnakes in the rainforests: reply to Gosling and Bush
Wuster, W., Wüster, W., Ferguson, J. E., Quijada-Mascarenas, J. A., Pook, C. E., Da Graca Salomao, M. & Thorpe, R. S., 1 Oct 2005, In: Molecular Ecology. 14, 11, p. 3619-3621
Research output: Contribution to journal › Article › peer-review
- PublishedOn the application of molecular barcodes in toxinological research
Creer, S., 1 Nov 2005, In: Toxicon. 46, 6, p. 709-710
Research output: Contribution to journal › Article › peer-review
- PublishedParadoxical polyembryony? Embryonic cloning in an ancient order of marine bryozoans
Hughes, R. N., D'Amato, M. E., Bishop, J. D., Carvalho, G. R., Craig, S. F., Hansson, L. J., Harley, M. A. & Pemberton, A. J., 22 Jun 2005, In: Biology Letters. 1, 2, p. 178-180
Research output: Contribution to journal › Article › peer-review
- PublishedParallelism of amino acid changes at the RH1 locus affecting spectral sensitivity among deep-water cichlids from Lakes Tanganyika and Malawi.
Sugawara, T., Terai, Y., Imai, H., Turner, G. F., Koblmuller, S., Strumbauer, C., Shichida, Y. & Okada, N., 12 Apr 2005, In: Proceedings of the National Academy of Sciences of the USA. 102, 15, p. 5448-5453
Research output: Contribution to journal › Article › peer-review
- PublishedPhylogeography of the cyprinid Squalius aradensis and implications for conservation of the endemic freshwater fauna of southern Portugal
Mesquita, N., Hanfling, B., Carvalho, G. R. & Coelho, M. M., 1 Jun 2005, In: Molecular Ecology. 14, 7, p. 1939-1954
Research output: Contribution to journal › Article › peer-review
- PublishedPopulation genetic structure and history of the long-tailed hake, Macruronus magellanicus, in the SW Atlantic as revealed by mtDNA RFLP analysis
Carvalho, G. R. & D'Amato, M. E., 1 Apr 2005, In: ICES Journal of Marine Science. 62, 2, p. 247-255
Research output: Contribution to journal › Article › peer-review
- PublishedSize dependent microhabitat use and intraspecific competition in Cottus gobio.
Davey, A. J., Hawkins, S. J., Turner, G. F. & Doncaster, C. P., 1 Aug 2005, In: Journal of Fish Biology. 67, 2, p. 428-443
Research output: Contribution to journal › Article › peer-review
- PublishedSnakes across the Strait: trans-Torresian phylogeographic relationships in three genera of Australasian snakes (Serpentes : Elapidae : Acanthophis, Oxyuranus, and Pseudechis).
Wuster, W., Wüster, W., Dumbrell, A. J., Hay, C., Pook, C. E., Williams, D. J. & Fry, B. G., 1 Jan 2005, In: Molecular Phylogenetics and Evolution. 34, 1, p. 1-14
Research output: Contribution to journal › Article › peer-review
- PublishedSnakes of Papua New Guinea.
Wuster, W., Williams, D., Wüster, W., Jensen, S. (ed.), Nimorakiotakis, B. (ed.) & Winkel, K. D. (ed.), 1 Jan 2005, Venomous bites and stings in Papua New Guinea: A guide to treatment for health workers and doctors. 2005 ed. Parkville, Vic. : Australian Venom Research Unit, p. 33-64
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedTargeting optimal introns for phylogenetic analyses in non-model taxa: experimental results in Asian pitvipers.
Creer, S., Malhotra, A., Thorpe, R. S. & Pook, C. E., 1 Aug 2005, In: Cladistics. 21, 4, p. 390-395
Research output: Contribution to journal › Article › peer-review
- PublishedThe dynamics of genetic and morphological variation on volcanic islands
Gubitz, T., Thorpe, R. & Malhotra, A., 7 Apr 2005, In: Proceedings of The Royal Society B - Biological Sciences. 272, 1564, p. 751-757
Research output: Contribution to journal › Article › peer-review
- PublishedThe mbuna cichlids of Lake Malawi: a model for rapid speciation and adaptive radiation.
Genner, M. J. & Turner, G. F., 1 Mar 2005, In: Fish and Fisheries. 6, 1, p. 1-34
Research output: Contribution to journal › Article › peer-review
- PublishedThe response of epilithic bacteria to different metals regime in two upland streams: assessed by conventional microbiological methods and PCR-DGGE
Mahmoud, H. M., Goulder, R. & Carvalho, G. R., 1 Jul 2005, In: Archiv Fur Hydrobiologie. 163, 3, p. 405-427
Research output: Contribution to journal › Article › peer-review
- PublishedTracing an invasion: landbridges, refugia, and the phylogeography of the Neotropical rattlesnake (Serpentes : Viperidae : Crotalus durissus)
Wuster, W., Ferguson, J. E., Quijada-Mascarenas, J. A., Pook, C. E., Salomao, M. D. & Thorpe, R., 25 Feb 2005, In: Molecular Ecology. 14, 4, p. 1095-1108
Research output: Contribution to journal › Article › peer-review
2004
- Published13CO2 pulse labelling of plants in tandem with stable isotope probing: methodological considerations for examining microbial function in the rhizosphere
Griffiths, R. I., Manefield, M., Ostle, N., McNamara, N., O'Donnell, A. G., Bailey, M. J. & Whiteley, A. S., Jul 2004, In: Journal of Microbiological Methods. 58, 1, p. 119-129 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedA phylogeny of four mitochondrial gene regions suggests a revised taxonomy for Asian pitvipers (Trimeresurus and Ovophis).
Malhotra, A. & Thorpe, R. S., 1 Jul 2004, In: Molecular Phylogenetics and Evolution. 32, 1, p. 83-100
Research output: Contribution to journal › Article › peer-review
- PublishedA review of the southern African ‘non-spitting’ cobras (Serpentes: Elapidae: Naja).
Wuster, W., Broadley, D. G. & Wüster, W., 1 Jan 2004, In: African Journal of Herpetology. 53, 2, p. 101-122
Research output: Contribution to journal › Article › peer-review
- PublishedAssembling an arsenal: Origin and evolution of the snake venom proteome inferred from phylogenetic analysis of toxin sequences.
Wuster, W., Fry, B. G. & Wüster, W., 1 May 2004, In: Molecular Biology and Evolution. 21, 5, p. 870-883
Research output: Contribution to journal › Article › peer-review
- PublishedBeta diversity of rock-restricted cichlid fishes in Lake Malawi: importance of environmental and spatial factors.
Genner, M. J., Taylor, M. I., Cleary, D. F., Hawkins, S. J., Knight, M. E. & Turner, G. F., 1 Oct 2004, In: Ecography. 27, 5, p. 601-610
Research output: Contribution to journal › Article › peer-review
- PublishedDNA markers indicate that distinct spawning cohorts and aggregations of Patagonian squid, Loligo gahi, do not represent genetically discrete subpopulations
Shaw, P. W., Arkhipkin, A. I., Adcock, G. J., Burnett, W. J., Carvalho, G. R., Scherbich, J. N. & Villegas, P. A., 1 May 2004, In: Marine Biology. 144, 5, p. 961-970
Research output: Contribution to journal › Article › peer-review
- PublishedDifferences in sounds made by courting males of three closely related Lake Malawi cichlid species.
Amorim, M. C., Knight, M. E., Stratoudakis, Y. & Turner, G. F., 1 Nov 2004, In: Journal of Fish Biology. 65, 5, p. 1358-1371
Research output: Contribution to journal › Article › peer-review
- PublishedDo aposematism and Batesian mimicry require bright colours? A test, using European viper markings.
Wuster, W., Wüster, W., Allum, C. S., Bjargardottir, I. B., Bailey, K. L., Dawson, K. J., Guenioui, J., Lewis, J., McGurk, J., Moore, A. G., Niskanen, M. & Pollard, C. P., 7 Dec 2004, In: Proceedings of The Royal Society B - Biological Sciences. 271, 1556, p. 2495-2499
Research output: Contribution to journal › Article › peer-review
- PublishedEcological diversification in a group of Indomalayan pitvipers (Trimeresurus): convergence in taxonomically important traits has implications for species identification.
Sanders, K. L., Malhotra, A. & Thorpe, R. S., 1 Jul 2004, In: Journal of Evolutionary Biology. 17, 4, p. 721-731
Research output: Contribution to journal › Article › peer-review
- PublishedEvolutionary differentiation of bimaculatus group anoles based on analyses of mtDNA and microsatellite data.
Stenson, A. G., Thorpe, R. S. & Malhotra, A., 1 Jul 2004, In: Molecular Phylogenetics and Evolution. 32, 1, p. 1-10
Research output: Contribution to journal › Article › peer-review
- PublishedHow does the taxonomic status of allopatric populations influence species richness within African cichlid fish assemblages?
Genner, M. J., Seehausen, O., Cleary, D. F., Knight, M. E., Michel, E. & Turner, G. F., 1 Jan 2004, In: Journal of Biogeography. 31, 1, p. 93-102
Research output: Contribution to journal › Article › peer-review
- PublishedIdentification and biology of Diplotaxodon, Rhamphochromis and Pallidochromis.
Turner, G. F., Robinson, R. L., Shaw, P. W., Carvalho, G. R. & Snoeks, J. (ed.), 1 Jan 2004, The Cichlid Diversity of Lake Malawi/Nyasa/Niassa: Identification: Distribution and Taxonomy. 2004 ed. Cichlid Press, p. 198-251
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedLaboratory mating trials indicate incipient speciation by sexual selection among populations of the cichlid fish Pseudotropheus zebra from Lake Malawi.
Knight, M. E. & Turner, G. F., 7 Apr 2004, In: Proceedings of The Royal Society B - Biological Sciences. 271, 1540, p. 675-680
Research output: Contribution to journal › Article › peer-review
- PublishedMaximizing information in systematic revisions: a combined molecular and morphological analysis of a cryptic green pitviper complex (Trimeresurus stejnegeri).
Malhotra, A. & Thorpe, R. S., 1 Jun 2004, In: Biological Journal of the Linnean Society. 82, 2, p. 219-235
Research output: Contribution to journal › Article › peer-review
- PublishedMorphometric analysis of Trimeresurus vogeli (David, Vidal and Pauwels, 2001), with new data on diagnostic characteristics, distribution and natural history.
Malhotra, A., Thorpe, R. S. & Stuart, B. L., 1 Apr 2004, In: Herpetological Journal. 14, 2, p. 65-77
Research output: Contribution to journal › Article › peer-review
- PublishedRaman Microscopic Analysis of Single Microbial Cells: Analytical Chemistry
Huang, W. E., Griffiths, R. I., Thompson, I. P., Bailey, M. J. & Whiteley, A. S., 2004, In: Analytical Chemistry. 76, 15, p. 4452-4458 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedReassessment of the validity and diagnosis of the pitviper Trimeresurus venustus Vogel, 1991.
Malhotra, A. & Thorpe, R. S., 1 Jan 2004, In: Herpetological Journal. 14, 1, p. 21-33
Research output: Contribution to journal › Article › peer-review
- PublishedRedescription and systematics of trimeresurus cornutus (Serpentes : Viperidae) based on morphology and molecular data.
Herrmann, H. W., Ziegler, T., Malhotra, A., Thorpe, R. & Parkinson, C. L., 1 May 2004, In: Herpetologica. 60, 2, p. 211-221
Research output: Contribution to journal › Article › peer-review
- PublishedThe utility of AFLPs for supporting mitochondrial DNA phylogeographical analyses in the Taiwanese bamboo viper, Trimeresurus stejnegeri
Creer, S., Thorpe, R., Malhotra, A., Chou, W. H. & Stenson, A. G., 1 Jan 2004, In: Journal of Evolutionary Biology. 17, 1, p. 100-107
Research output: Contribution to journal › Article › peer-review
- PublishedVariation in habitat preference and population structure among three species of the Lake Malawi cichlid genus Protomelas
Pereyra, R., Taylor, M. I., Turner, G. F. & Rico, C., 1 Sept 2004, In: Molecular Ecology. 13, 9, p. 2691-2697
Research output: Contribution to journal › Article › peer-review
2003
- PublishedA new species of spitting cobra (Naja) from north-eastern Africa (Serpentes : Elapidae)
Wuster, W., Wüster, W. & Broadley, D. G., 1 Jan 2003, In: Journal of Zoology. 259, 4, p. 345-359
Research output: Contribution to journal › Article › peer-review
- PublishedAnalysis of Colubroidea snake venoms by liquid chromatography with mass spectrometry: evolutionary and toxinological implications.
Wuster, W., Fry, B. G., Wüster, W., Ramjan, S. F., Jackson, T., Martelli, P. & Kini, R. M., 1 Aug 2003, In: Rapid communications in Mass Spectrometry. 17, 18, p. 2047-2062
Research output: Contribution to journal › Article › peer-review
- PublishedAnalysis of the microbial functional diversity within water-stressed soil communities by flow cytometric analysis and CTC+ cell sorting
Whiteley, A. S., Griffiths, R. I. & Bailey, M. J., Aug 2003, In: Journal of Microbiological Methods. 54, 2, p. 257-267 11 p.
Research output: Contribution to journal › Article › peer-review
- PublishedAssessing the phylogenetic utility of four mitochondrial genes and a nuclear intron in the Asian pit viper genus, Trimeresurus: Separate, simultaneous, and conditional data combination analyses
Creer, S., Malhotra, A. & Thorpe, R. S., 1 Aug 2003, In: Molecular Biology and Evolution. 20, 8, p. 1240-1251
Research output: Contribution to journal › Article › peer-review
- PublishedDivergent selection during speciation of Lake Malawi cichlid fishes inferred from parallel radiations in nuptial coloration.
Allender, C. J., Seehausen, O., Knight, M. E., Turner, G. F. & Maclean, N., 25 Nov 2003, In: Proceedings of the National Academy of Sciences of the USA. 100, 24, p. 14074-14079
Research output: Contribution to journal › Article › peer-review
- PublishedEffectiveness of snake antivenom: Species and regional venom variation and its clinical impact.
Wuster, W., Fry, B. G., Winkel, K. D., Wickramaratna, J. C., Hodgson, W. C. & Wüster, W., 1 Jun 2003, In: Journal of Toxicology - Toxin Reviews. 22, 1, p. 23-34
Research output: Contribution to journal › Article › peer-review
- PublishedGenetic and ecological correlates of intraspecific variation in pitviper venom composition detected using matirx-assisted laser desorption time-of-flight mass spectrometry (MALDI-TOF-MS) and isoelectric focusing
Creer, S., Malhotra, A., Thorpe, R., Stocklin, R. S., Favreau, P. S. & Chou, W. S., 1 Mar 2003, In: Journal of Molecular Evolution. 56, 3, p. 317-329
Research output: Contribution to journal › Article › peer-review
- PublishedGeographic distribution: Bothriopsis taeniata or Bothrops taeniatus (Speckled forest-pitviper).
Wuster, W., Freire, L. A., Garcia, F., Wüster, W. & Kuch, U., 1 Jan 2003, In: Herpetological Review. 34, p. 263
Research output: Contribution to journal › Article › peer-review
- PublishedInbreeding depression and genetic load of sexually selected traits: how the guppy lost its spots.
Van Oosterhout, C., Trigg, R. E., Carvalho, G. R., Magurran, A. E., Hauser, L. & Shaw, P. W., 1 Mar 2003, In: Journal of Evolutionary Biology. 16, 2, p. 273-281
Research output: Contribution to journal › Article › peer-review
- PublishedInfluence of depth and sampling time on bacterial community structure in an upland grassland soil
Griffiths, R. I., Whiteley, A. S., O'Donnell, A. G. & Bailey, M. J., Feb 2003, In: Fems Microbiology Ecology. 43, 1, p. 35-43 9 p.
Research output: Contribution to journal › Article › peer-review
- PublishedIsolation and characterization of polymorphic microsatellite loci in the endangered Portuguese freshwater fish Squalis aradensis (Cyprinidae)
Mesquita, N., Cunha, C., Hanfling, B., Carvalho, G. R., Ze-Ze, L., Tenreiro, R. & Coelho, M. M., 1 Dec 2003, In: Molecular Ecology Notes. 3, 4, p. 572-574
Research output: Contribution to journal › Article › peer-review
- PublishedIsolation of a neurotoxin (alpha colubritoxin) from a nonvenomous colubrid: Evidence for early origin of venom in snakes
Wuster, W., Fry, B. G., Lumsden, N. G., Wüster, W., Wickramaratna, J. C., Hodgson, W. C. & Kini, R. M., 1 Oct 2003, In: Journal of Molecular Evolution. 57, 4, p. 446-452
Research output: Contribution to journal › Article › peer-review
- PublishedIsotopic change throughout the life history of a Lake Malawi cichlid fish.
Genner, M. J., Hawkins, S. J. & Turner, G. F., 1 Apr 2003, In: Journal of Fish Biology. 62, 4, p. 907-917
Research output: Contribution to journal › Article › peer-review
- PublishedMicrosatellite analysis of genetic population structure of the endangered cyprinid Anaecypris hispanica in Portugal: implications for conservation.
Salgueiro, P., Carvalho, G. R., Collares-Pereira, M. J. & Coelho, M. M., 1 Jan 2003, In: Biological Conservation. 109, 1, p. 47-56
Research output: Contribution to journal › Article › peer-review
- PublishedMolecular evolution and phylogeny of elapid snake venom three-finger toxins.
Wuster, W., Fry, B. G., Wüster, W., Kini, R. M., Brusic, V., Khan, A., Venkataraman, D. & Rooney, A. P., 1 Jul 2003, In: Journal of Molecular Evolution. 57, 1, p. 110-129
Research output: Contribution to journal › Article › peer-review
- PublishedNo evidence for parallel sympatric speciation in cichlid species of the genus Pseudotropheus from north-western Lake Malawi.
Rico, C., Bouteillon, P., Van Oppen, M. J., Knight, M. E., Hewitt, G. M. & Turner, G. F., 1 Jan 2003, In: Journal of Evolutionary Biology. 16, 1, p. 37-46
Research output: Contribution to journal › Article › peer-review
- PublishedNuclear markers reveal unexpected genetic variation and a Congolese-Nilotic origin of the Lake Victoria cichlid species flock.
Seehausen, O., Koetsier, E., Schneider, M. V., Chapman, L. J., Chapman, C. A., Knight, M. E., Turner, G. F., Van Alphen, J. J. & Bills, R., 22 Jan 2003, In: Proceedings of The Royal Society B - Biological Sciences. 270, 1511, p. 129-137
Research output: Contribution to journal › Article › peer-review
- PublishedPhysiological and Community Responses of Established Grassland Bacterial Populations to Water Stress
I., G. R., S., W. A., G., OD. A. & J., B. M., Dec 2003, In: Applied and Environmental Microbiology. 69, 12, p. 6961-6968 8 p.
Research output: Contribution to journal › Article › peer-review
- PublishedTemporal analysis of archived samples indicates marked genetic changes in declining North Sea cod.
Hutchinson, W. F., Van Oosterhout, C., Rogers, S. I. & Carvalho, G. R., 1 Oct 2003, In: Proceedings of The Royal Society B - Biological Sciences. 270, 1529, p. 2125-2132
Research output: Contribution to journal › Article › peer-review
- PublishedTemporal stability of genetic population structure in the New Zealand snapper, Pagrus auratus, and relationship to coastal currents
Bernal-Ramirez, J. H., Adcock, G. J., Hauser, L., Carvalho, G. R. & Smith, P. J., 1 Mar 2003, In: Marine Biology. 142, 3, p. 567-574
Research output: Contribution to journal › Article › peer-review
- PublishedThe conserved structure of snake venom toxins confers extensive immunological cross-reactivity to toxin-specific antibody.
Wuster, W., Harrison, R. A., Wüster, W. & Theakston, R. D., 1 Mar 2003, In: Toxicon. 41, 4, p. 441-449
Research output: Contribution to journal › Article › peer-review
2002
- PublishedA new species of wolf snake (Serpentes : Colubridae : Lycodon) from the Cardamom Mountains, southwestern Cambodia
Wuster, W., Daltry, J. C. & Wüster, W., 1 Dec 2002, In: Herpetologica. 58, 4, p. 498-504
Research output: Contribution to journal › Article › peer-review
- PublishedA technique for the molecular genetic analysis of Daphnia resting eggs from sub-recent lake sediments.
Reid, V. A., Carvalho, G. R., George, D. G. & Griffiths, H. I., 1 May 2002, In: Journal of Paleolimnology. 27, 4, p. 481-486
Research output: Contribution to journal › Article › peer-review
- PublishedCharacterization of tetranucleotide microsatellite loci in a Lake Victorian, haplochromine cichlid fish: a Pundamilia pundamilia x Pundamilia nyererei hybrid
Taylor, M. I., Meardon, F., Turner, G. F., Seehausen, O., Mrosso, H. D. & Rico, C., 1 Dec 2002, In: Molecular Ecology Notes. 2, 4, p. 443-445
Research output: Contribution to journal › Article › peer-review
- PublishedComparative demographic impacts of 'info-chemicals' and exploitative competition: an empirical test using Daphnia magna.
Mitchell, S. E. & Carvalho, G. R., 1 Mar 2002, In: Freshwater Biology. 47, 3, p. 459-471
Research output: Contribution to journal › Article › peer-review
- PublishedElectrospray liquid chromatography/mass spectrometry fingerprinting of Acanthophis (death adder) venoms: taxonomic and toxinological implications.
Wuster, W., Fry, B. G., Wickramaratna, J. C., Hodgson, W. C., Alewood, P. F., Kini, R. M., Ho, H. & Wüster, W., 1 Feb 2002, In: Rapid communications in Mass Spectrometry. 16, 6, p. 600-608
Research output: Contribution to journal › Article › peer-review
- PublishedExtensive population subdivision of the cuttlefish Sepia officinalis (Mollusca : Cephalopoda) around the Iberian Peninsula indicated by microsatellite DNA variation.
Perez-Losada, M., Guerra, A., Carvalho, G. R., Sanjuan, A. & Shaw, P. W., 1 Dec 2002, In: Heredity. 89, 6, p. 417-424
Research output: Contribution to journal › Article › peer-review
- PublishedExtreme microallopatric divergence in a cichlid species from Lake Malawi.
Rico, C. & Turner, G. F., 1 Aug 2002, In: Molecular Ecology. 11, 8, p. 1585-1590
Research output: Contribution to journal › Article › peer-review
- PublishedLate glacial history of the cold-adapted freshwater fish Cottus gobio, revealed by microsatellites.
Hanfling, B., Hellemans, B., Volckaert, F. A. & Carvalho, G. R., 1 Sept 2002, In: Molecular Ecology. 11, 9, p. 1717-1729
Research output: Contribution to journal › Article › peer-review
- PublishedLoss of microsatellite diversity and low effective population size in an overexploited population of New Zealand snapper.
Hauser, L., Adcock, G. J., Smith, P. J., Ramirez, J. H. & Carvalho, G. R., 1 Sept 2002, In: Proceedings of the National Academy of Sciences of the USA. 99, 18, p. 11742-11747
Research output: Contribution to journal › Article › peer-review
- PublishedMeasuring genetic variation in wild populations: from molecular markers to adaptive traits.
Carvalho, G. R., Van Oosterhout, C., Hauser, L., Magurran, A. E., Hails, R. (ed.), Beringer, J. (ed.) & Godfray, H. C. (ed.), 1 Jan 2002, Genes in the Environment. 2002 ed. Cambridge University Press, p. 91-111
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedMicro- and macrogeographic genetic structure in bryozoans with different larval strategies.
Porter, J. S., Ryland, J. S. & Carvalho, G. R., 24 Jun 2002, In: Journal of Experimental Marine Biology and Ecology. 272, 2, p. 119-130
Research output: Contribution to journal › Article › peer-review
- PublishedOffshore insular variation in the diet of the Taiwanese bamboo viper Trimeresurus stejnegeri (Schmidt)
Creer, S., Chou, W. H., Malhotra, A. & Thorpe, R. S., 1 Aug 2002, In: Zoological Science. 19, 8, p. 907-913
Research output: Contribution to journal › Article › peer-review
- PublishedOrigin and evolution of the South American pitviper fauna: evidence from mitochondrial DNA sequence analysis.
Wuster, W., Wüster, W., Salomao, M. G., Quijada-Mascarenas, J. A., Thorpe, R. S., Campbell, J. A. (ed.), Brodie, E. D. (ed.), Schuett, G. W. (ed.), Hoggren, M. (ed.), Douglas, M. E. (ed.) & Greene, H. W. (ed.), 1 Jan 2002, Biology of the Vipers. 2002 ed. Eagle Mountain Publishing, p. 111-128
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedOrigin and phylogenetic position of the Lesser Antillean species of Bothrops (Serpentes: Viperidae): biogeographical and medical implications.
Wuster, W., Wüster, W., Thorpe, R. S., Salomao, M. G., Thomas, L., Puorto, G., Theakston, R. D. & Warrell, D. A., 1 Jan 2002, In: Bulletin of the Natural History Museum London (Zoology). 68, p. 101-106
Research output: Contribution to journal › Article › peer-review
- PublishedParallel speciation, despeciation and respeciation: implications for species definition.
Turner, G. F., 1 Sept 2002, In: Fish and Fisheries. 3, 3, p. 225-229
Research output: Contribution to journal › Article › peer-review
- PublishedPelagic cichlid fishes of Lake Malawi/Nyasa: biology, management and conservation.
Turner, G. F., Robinson, R. L., Ngatunga, B. P., Shaw, P. W., Carvalho, G. R. & Cowx, I. G. (ed.), 1 Jan 2002, Management and Ecology of Lake and Reservoir Fisheries.. 2002 ed. Blackwell, p. 353-367
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedPopulation differentiation and nuclear gene flow in the Dominican anole (Anolis oculatus).
Stenson, A. G., Malhotra, A. & Thorpe, R. S., 1 Sept 2002, In: Molecular Ecology. 11, 9, p. 1679-1688
Research output: Contribution to journal › Article › peer-review
- PublishedRNA Stable Isotope Probing, a Novel Means of Linking Microbial Community Function to Phylogeny
Mike, M., S., W. A., I., G. R. & J., B. M., Nov 2002, In: Applied and Environmental Microbiology. 68, 11, p. 5367-5373 7 p.
Research output: Contribution to journal › Article › peer-review
- PublishedReconstruction of microsatellite mutation history reveals a strong and consistent deletion bias in invasive clonal snails, Potamopyrgus antipodarum.
Weetman, D., Hauser, L. & Carvalho, G. R., 1 Oct 2002, In: Genetics. 162, 2, p. 813-822
Research output: Contribution to journal › Article › peer-review
- PublishedSpeciation in ancient cryptic species complexes: evidence from the molecular phylogeny of Brachionus plicatilis (Rotifera).
Gomez, A., Serra, M., Carvalho, G. R. & Lunt, D. H., 1 Jul 2002, In: Evolution. 56, 7, p. 1431-1444
Research output: Contribution to journal › Article › peer-review
- PublishedThe interplay between colonization history and gene flow in passively dispersing zooplankton: microsatellite analysis of rotifer resting eg banks.
Gomez, A., Adcock, G. J., Lunt, D. H. & Carvalho, G. R., 1 Jan 2002, In: Journal of Evolutionary Biology. 15, 1, p. 158-171
Research output: Contribution to journal › Article › peer-review
- PublishedTiming of the population dynamics of bullhead Cottus gobio (Teleostei : Cottidae) during the Pleistocene.
Volckaert, F. A., Hanfling, B., Hellemans, B. & Carvalho, G. R., 1 Nov 2002, In: Journal of Evolutionary Biology. 15, 6, p. 930-944
Research output: Contribution to journal › Article › peer-review
- Publishedmt-DNA sequences and possible invasion pathways of the Chinese mitten crab.
Hanfling, B., Carvalho, G. R. & Brandl, R., 9 Aug 2002, In: Marine Ecology Progress Series. 238, p. 307-310
Research output: Contribution to journal › Article › peer-review
2001
- PublishedA new species of indigo snake from north-western Venezuela (Serpentes : Colubridae : Drymarchon)
Wuster, W., Wüster, W., Yrausquin, J. L. & Mijares-Urrutia, A., 1 Oct 2001, In: Herpetological Journal. 11, 4, p. 157-165
Research output: Contribution to journal › Article › peer-review
- PublishedCombining mitochondrial DNA sequences and morphological data to infer species boundaries: phylogeography of lanceheaded pitvipers in the Brazilian Atlantic forest, and the status of Bothrops pradoi (Squamata : Serpentes : Viperidae).
Wuster, W., Puorto, G., Da Graca Salomao, M., Theakston, R. D., Thorpe, R. S., Warrell, D. A. & Wüster, W., 1 Jul 2001, In: Journal of Evolutionary Biology. 14, 4, p. 527-538
Research output: Contribution to journal › Article › peer-review
- PublishedDescription of two new species of Mylochromis (Teleostei: Cichlidae) from Lake Malawi, Africa.
Turner, G. F. & Howarth, J. D., 1 Jan 2001, In: Ichthyological Explorations of Freshwaters. 12, p. 205-212
Research output: Contribution to journal › Article › peer-review
- PublishedFishes, as well as birds, build bowers.
McKaye, K. R., Stauffer, J. R., Turner, G. F., Konings, A., Sato, T. & Coleman, R. M. (ed.), 1 Jan 2001, Cichlid Research: State of the Art. 2001 ed. University of Michigan, p. 121-133
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedHaplotype frequency distribution and discriminatory power of two mtDNA fragments in a marine pelagic teleost (Atlantic herring, Clupea harengus)
Hauser, L., Turan, C. & Carvalho, G. R., 1 Dec 2001, In: Heredity. 87, 6, p. 621-630
Research output: Contribution to journal › Article › peer-review
- PublishedHow many species of cichlid fishes are there in African lakes?
Turner, G. F., Seehausen, O., Knight, M. E., Allender, C. J. & Robinson, R. L., 1 Mar 2001, In: Molecular Ecology. 10, 3, p. 793-806
Research output: Contribution to journal › Article › peer-review
- PublishedIsolation and characterization of di- and trinucleotide microsatellites in the freshwater snail Potamopyrgus antipodarum.
Weetman, D., Hauser, L. & Carvalho, G. R., 1 Sept 2001, In: Molecular Ecology Notes. 1, 3, p. 185-187
Research output: Contribution to journal › Article › peer-review
- PublishedIsolation and characterization of microsatellites in the bryozoan Crisia denticulata
Craig, S. F., D'Amato, M. E., Harley, M., Bishop, J., Hughes, R. N. & Carvalho, G., 1 Dec 2001, In: Molecular Ecology Notes. 1, 4, p. 281-282
Research output: Contribution to journal › Article › peer-review
- PublishedMarked genetic structuring in localised spawning populations of cod Gadus morhua in the North Sea and adjoining waters, as revealed by microsatellites.
Hutchinson, W. F., Carvalho, G. R. & Rogers, S. I., 28 Nov 2001, In: Marine Ecology Progress Series. 223, p. 251-260
Research output: Contribution to journal › Article › peer-review
- PublishedMorphological and genetic adaptation to a lagoon environment: a case study in the bryozoan genus Alcyonidium
Porter, J. S., Dyrynda, P. E., Ryland, J. S. & Carvalho, G. R., 1 Sept 2001, In: Marine Biology. 139, 3, p. 575-585
Research output: Contribution to journal › Article › peer-review
- PublishedMultiple causation of phylogeographical pattern as revealed by nested clade analysis of the bamboo viper (Trimeresurus stejnegeri) within Taiwan.
Creer, S., Malhotra, A., Thorpe, R. S. & Chou, W. H., 1 Aug 2001, In: Molecular Ecology. 10, 8, p. 1967-1981
Research output: Contribution to journal › Article › peer-review
- PublishedNuclear and mtDNA phylogenies of the Trimeresurus complex: Implications for the gene versus species tree debate.
Giannasi, N., Malhotra, A. & Thorpe, R. S., 1 Apr 2001, In: Molecular Phylogenetics and Evolution. 19, 1, p. 57-66
Research output: Contribution to journal › Article › peer-review
- PublishedPelagic cichlid fishes of Lake Malawi/Nyasa.
Turner, G. F., Robinson, R. L., Ngatunga, B. P., Shaw, P. W., Carvalho, G. R. & Coleman, R. M. (ed.), 1 Jan 2001, Cichlid Research: State of the Art. 2001 ed. University of Michigan, p. 287-302
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedRiver basin-related genetic structuring in an endangered fish species, Chondrostoma lusitanicum, based on mtDNA sequencing and RFLP analysis
Mesquita, N., Carvalho, G. R., Shaw, P., Crespo, E. & Coelho, M. M., 1 Mar 2001, In: Heredity. 86, 3, p. 253-264
Research output: Contribution to journal › Article › peer-review
- PublishedThe use of amplified fragment length polymorphism in determining species trees at fine taxonomic levels: analysis of a medically important snake, Trimeresurus albolabris
Giannasi, N., Thorpe, R. S. & Malhotra, A., 1 Feb 2001, In: Molecular Ecology. 10, 2, p. 419-426
Research output: Contribution to journal › Article › peer-review
2000
- PublishedA new cobra (Elapidae : Naja) from Myanmar (Burma)
Wuster, W., Slowinski, J. B. & Wüster, W., 1 Jun 2000, In: Herpetologica. 56, 2, p. 257-270
Research output: Contribution to journal › Article › peer-review
- PublishedA phylogenetic analysis of body size evolution in the Anolis roquet group (Sauria : Iguanidae): character displacement or size assortment?
Giannasi, N., Thorpe, R. S. & Malhotra, A., 1 Feb 2000, In: Molecular Ecology. 9, 2, p. 193-202
Research output: Contribution to journal › Article › peer-review
- PublishedA phylogeny of the Trimeresurus group of pit vipers: New evidence from a mitochondrial gene tree.
Malhotra, A. & Thorpe, R. S., 1 Aug 2000, In: Molecular Phylogenetics and Evolution. 16, 2, p. 199-211
Research output: Contribution to journal › Article › peer-review
- PublishedExtensive homoplasy, nonstepwise mutations, and shared ancestral polymorphism at a complex microsatellite locus in Lake Malawi cichlids.
Van Oppen, M. J., Rico, C., Turner, G. F. & Hewitt, G. M., 1 Apr 2000, In: Molecular Biology and Evolution. 17, 4, p. 489-498
Research output: Contribution to journal › Article › peer-review
- PublishedGenetic population structure indicates sympatric speciation of Lake Malawi pelagic cichlids.
Shaw, P. W., Turner, G. F., Idid, M. R., Robinson, R. L. & Carvalho, G. R., 22 Nov 2000, In: Proceedings of The Royal Society B - Biological Sciences. 267, 1459, p. 2273-2280
Research output: Contribution to journal › Article › peer-review
- PublishedHistorical biogeography of the western rattlesnake (Serpentes : Viperidae : Crotalus viridis), inferred from mitochondrial DNA sequence information
Pook, C. E., Wuster, W. & Thorpe, R. S., 1 May 2000, In: Molecular Phylogenetics and Evolution. 15, 2, p. 269-282
Research output: Contribution to journal › Article › peer-review
- PublishedMolecular genetic analysis of Daphnia in the English Lake District: species identity, hybridisation and resting egg banks.
Reid, V. A., Carvalho, G. R. & George, D. G., 1 Jun 2000, In: Freshwater Biology. 44, 2, p. 247-253
Research output: Contribution to journal › Article › peer-review
- PublishedPhylogeography and natural selection in the Tenerife gecko Tarentola delalandii: testing historical and adaptive hypotheses.
Gubitz, T., Thorpe, R. S. & Malhotra, A., 1 Sept 2000, In: Molecular Ecology. 9, 9, p. 1213-1221
Research output: Contribution to journal › Article › peer-review
- PublishedPhylogeography and regional endemism of a passively dispersing zooplankter: mitochondrial DNA variation in rotiferresting egg banks.
Gomez, A., Carvalho, G. R. & Lunt, D. H., 7 Nov 2000, In: Proceedings of The Royal Society B - Biological Sciences. 267, 1458, p. 2189-2197
Research output: Contribution to journal › Article › peer-review
- PublishedRapid Method for Coextraction of DNA and RNA from Natural Environments for Analysis of Ribosomal DNA- and rRNA-Based Microbial Community Composition
I., G. R., S., W. A., G., OD. A. & J., B. M., Dec 2000, In: Applied and Environmental Microbiology. 66, 12, p. 5488-5491 4 p.
Research output: Contribution to journal › Article › peer-review
- PublishedReproductive biology, mating systems and parental care.
Turner, G. F., Robinson, R. L., Beveridge, M. C. (ed.) & McAndrew B.J., N. V. (ed.), 1 Jan 2000, Tilapias: biology and exploitation. 2000 ed. Springer, p. 32-58
Research output: Chapter in Book/Report/Conference proceeding › Chapter
- PublishedScreening of DNA polymorphisms in samples of archived scales from New Zealand snapper.
Adcock, G. J., Ramirez, J. H., Hauser, L., Smith, P. & Carvalho, G. R., 1 May 2000, In: Journal of Fish Biology. 56, 5, p. 1283-1287
Research output: Contribution to journal › Article › peer-review
- PublishedSex, parthenogenesis and genetic structure of rotifers: microsatellite analysis of contemporary and resting egg bank populations.
Gomez, A. & Carvalho, G. R., 1 Feb 2000, In: Molecular Ecology. 9, 2, p. 203-214
Research output: Contribution to journal › Article › peer-review
- PublishedThe dynamics of natural selection and vicariance in the Dominican anole: Patterns of within-island molecular and morphological divergence.
Malhotra, A. & Thorpe, R. S., 1 Feb 2000, In: Evolution. 54, 1, p. 245-258
Research output: Contribution to journal › Article › peer-review
- PublishedThe nature species in ancient lakes: perspectives from the fishes of Lake Malawi.
Turner, G. F., 1 Aug 2000, In: Advances in Ecological Research. 31, p. 39-60
Research output: Contribution to journal › Article › peer-review